RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 RBM4BQ9BQ04 359 aaKnown RBP7.35□□□□□ -1.23
TRIM49-201ENST00000329758 TINF2Q9BSI4 451 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 NAT9Q9BTE0 207 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 RBM4Q9BWF3 364 aaKnown RBP7.35□□□□□ -1.23
TRIM49-201ENST00000329758 SLC19A3Q9BZV2 496 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 LHX5Q9H2C1 402 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 RNF121Q9H920 327 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 MEAF6Q9HAF1 191 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 GBA2Q9HCG7 927 aaPredicted RBP7.35□□□□□ -1.23
TRIM49-201ENST00000329758 NMRK2Q9NPI5 230 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 ZNF358Q9NW07 568 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 HPF1Q9NWY4 346 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 PTTG3PQ9NZH4 202 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 EGFL7Q9UHF1 273 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 C3orf18Q9UK00 162 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 TSPAN16Q9UKR8 245 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 PNMA8BQ9ULN7 279 aaPredicted RBP7.35□□□□□ -1.23
TRIM49-201ENST00000329758 RNF112Q9ULX5 631 aa7.35□□□□□ -1.23
TRIM49-201ENST00000329758 A0A075B6Q4 140 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 PQLC2LA1A4F0 135 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 MEIS3P2A8K0S8 358 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 PTGES3LE9PB15 166 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 UPK1AO00322 258 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 ABCD4O14678 606 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 GNB5O14775 395 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SLC16A6O15403 523 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 TREHO43280 583 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 RGS10O43665 173 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 PRPSAP2O60256 369 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 LSM8O95777 96 aaKnown RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 MT-ND2P03891 347 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 APRTP07741 180 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SMIM10L2AP0DMW4 78 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SMIM10L2BP0DMW5 78 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 ITGAMP11215 1152 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SLC2A4P14672 509 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 PGAM1P18669 254 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 LMO2P25791 158 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 CD6P30203 668 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 MIPP30301 263 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SPRP35270 261 aaPredicted RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 MAP2K4P45985 399 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 ATP5OP48047 213 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 LIMK2P53671 638 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 YWHAEP62258 255 aaKnown RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SNRPD2P62316 118 aaKnown RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 KCNAB2Q13303 367 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 BTN1A1Q13410 526 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 CAMK1Q14012 370 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 PRPSAP1Q14558 356 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 ZNF169Q14929 603 aaPredicted RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 QPRTQ15274 297 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 GOLGA7BQ2TAP0 167 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 HSD17B12Q53GQ0 312 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 ZC3H12BQ5HYM0 836 aaKnown RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 CST9Q5W186 159 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 RAP1GAP2Q684P5 730 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SCYL2Q6P3W7 929 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 TXNDC11Q6PKC3 985 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 LAYNQ6UX15 382 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 FAM183BPQ6ZVS7 135 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 OVCH2Q7RTZ1 564 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 STRA8Q7Z7C7 330 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 PROSER1Q86XN7 944 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SCUBE3Q8IX30 993 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 RIMKLAQ8IXN7 391 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 PLD6Q8N2A8 252 aaKnown RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 NAT16Q8N8M0 369 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 ATOH1Q92858 354 aaPredicted RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 TMBIM1Q969X1 311 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 PDLIM5Q96HC4 596 aaKnown RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 RBBP8Q99708 897 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 ACE2Q9BYF1 805 aaPredicted RBP7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SHARPINQ9H0F6 387 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 TMEM245Q9H330 911 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 C3orf14Q9HBI5 128 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 LRRC4Q9HBW1 653 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SDHAF3Q9NRP4 125 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 EVA1BQ9NVM1 165 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 ERVK-18Q9QC07 812 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 TINAGQ9UJW2 476 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 LIPT1Q9Y234 373 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 SESN1Q9Y6P5 492 aa7.34□□□□□ -1.23
TRIM49-201ENST00000329758 LOC100130705A0A1B0GUX0 176 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 CIB4A0PJX0 185 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 FAM92AA1XBS5 289 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 BCLAF3A2AJT9 711 aaKnown RBP7.33□□□□□ -1.24
TRIM49-201ENST00000329758 SH3D21A4FU49 640 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 MROH6A6NGR9 719 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 B4DXG7 233 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 HRO43593 1189 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 RHOBTB1O94844 696 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 LRIG2O94898 1065 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 PAPSS2O95340 614 aaPredicted RBP7.33□□□□□ -1.24
TRIM49-201ENST00000329758 IFNA7P01567 189 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 RPLP0P05388 317 aaKnown RBP7.33□□□□□ -1.24
TRIM49-201ENST00000329758 TPOP07202 933 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 ALAS2P22557 587 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 ADORA2BP29275 332 aa7.33□□□□□ -1.24
TRIM49-201ENST00000329758 AFF1P51825 1210 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms