RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 UGT1A4P22310 534 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 UGT1A3P35503 534 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 UGT1A5P35504 534 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 MAPK9P45984 424 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 BLKP51451 505 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 ATP13A5Q4VNC0 1218 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 CDKL4Q5MAI5 379 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 PERM1Q5SV97 790 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 C6orf132Q5T0Z8 1188 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 ZCCHC8Q6NZY4 707 aaKnown RBP16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 METTL2BQ6P1Q9 378 aaKnown RBP16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 PIM3Q86V86 326 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 KYQ8NBH2 561 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 DDHD1Q8NEL9 900 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 CNTNAP3BQ96NU0 1288 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 CNTNAP3Q9BZ76 1288 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 ZCCHC2Q9C0B9 1178 aaKnown RBP16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 ALG9Q9H6U8 611 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 GULP1Q9UBP9 304 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 APC2O95996 2303 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 ANKRD11Q6UB99 2663 aaPredicted RBP16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 CFAP47Q6ZTR5 3102 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 CPED1A4D0V7 1026 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 FAM221BA6H8Z2 402 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 STX16-NPEPL1H3BU86 382 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 STX16O14662 325 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 HNRNPCL1O60812 293 aaKnown RBP16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 MTX2O75431 263 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 RFPL3O75679 317 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 ATP1B2P14415 290 aaPredicted RBP16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 KELP23276 732 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 NAGLUP54802 743 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 DAB2P98082 770 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 CTBSQ01459 385 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 ELOCQ15369 112 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 PYCR3Q53H96 274 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 TTC23LQ6PF05 361 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 TMPRSS7Q7RTY8 843 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 TAF8Q7Z7C8 310 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 GPBAR1Q8TDU6 330 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 ATOH8Q96SQ7 321 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 SORT1Q99523 831 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 DUSP23Q9BVJ7 150 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 ATXN10Q9UBB4 475 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 RNF112Q9ULX5 631 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 GPR34Q9UPC5 381 aa16.05■□□□□ 0.16
PDLIM1-201ENST00000329399 A8MT66 165 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 C1QTNF9BB2RNN3 333 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 ZBTB14O43829 449 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 KLK8O60259 260 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 CCDC22O60826 627 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 NIPSNAP2O75323 286 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 SLC25A14O95258 325 aaPredicted RBP16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 TRIM16O95361 564 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 EML2O95834 649 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 FTH1P02794 183 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 C1QTNF9P0C862 333 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 ALPPL2P10696 532 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 RPL14P50914 215 aaKnown RBP16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 HERVK_113P63132 956 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 INSM1Q01101 510 aaPredicted RBP16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 PLEKHS1Q5SXH7 462 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 GPRC6AQ5T6X5 926 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 FAM91A1Q658Y4 838 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 ZCCHC23Q6ZST2 131 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 NEK10Q6ZWH5 1172 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 MYO1HQ8N1T3 1032 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 ZBTB2Q8N680 514 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 FAM46DQ8NEK8 389 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 NAT14Q8WUY8 206 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 PATE1Q8WXA2 126 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 C1QTNF3Q9BXJ4 246 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 ERVK-6Q9BXR3 956 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 KCNK13Q9HB14 408 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 DNAJC16Q9Y2G8 782 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 GPSM3Q9Y4H4 160 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 PCDHGA1Q9Y5H4 931 aa16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 TNPO3Q9Y5L0 923 aaKnown RBP16.04■□□□□ 0.16
PDLIM1-201ENST00000329399 A0A0G2JND7 137 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 EME2A4GXA9 379 aaPredicted RBP16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 NOBOXO60393 691 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 TSPAN12O95859 305 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 ZNF8P17098 575 aaPredicted RBP16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 MSH3P20585 1137 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 TBCCQ15814 346 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 METTL21CQ5VZV1 264 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 OGFOD3Q6PK18 319 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 SLC30A9Q6PML9 568 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 EFL1Q7Z2Z2 1120 aaKnown RBP16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 ADGRG6Q86SQ4 1221 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 PHYKPLQ8IUZ5 450 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 SIDT2Q8NBJ9 832 aaKnown RBP16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 IFI44Q8TCB0 444 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 GATA6Q92908 595 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 GLYATL1Q969I3 302 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 PTERQ96BW5 349 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 CCDC97Q96F63 343 aaPredicted RBP16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 LINGO1Q96FE5 620 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 ZNF514Q96K75 400 aaPredicted RBP16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 TMEM120AQ9BXJ8 343 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms