RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ZDHHC5Q9C0B5 715 aa17.93■□□□□ 0.46
USP39-201ENST00000323701 MRPL40Q9NQ50 206 aaKnown RBP17.93■□□□□ 0.46
USP39-201ENST00000323701 KLQ9UEF7 1012 aa17.93■□□□□ 0.46
USP39-201ENST00000323701 BAIAP2L1Q9UHR4 511 aa17.93■□□□□ 0.46
USP39-201ENST00000323701 PACSIN3Q9UKS6 424 aa17.93■□□□□ 0.46
USP39-201ENST00000323701 SCAMP1O15126 338 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 CATP04040 527 aaKnown RBP17.92■□□□□ 0.46
USP39-201ENST00000323701 EBLN1P0CF75 366 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 HMOX2P30519 316 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 NAE1Q13564 534 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 KIAA1161Q6NSJ0 714 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 PHC3Q8NDX5 983 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 HM13Q8TCT9 377 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 NUDT8Q8WV74 236 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 FBRSQ9HAH7 460 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 EBF1Q9UH73 591 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 MMP17Q9ULZ9 603 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 PLEKHM1Q9Y4G2 1056 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 GPR45Q9Y5Y3 372 aa17.92■□□□□ 0.46
USP39-201ENST00000323701 POM121BA6NF01 834 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 CD22P20273 847 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 DPP6P42658 865 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 ERFP50548 548 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 TPMTP51580 245 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 CLDN2P57739 230 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 HMGCS1Q01581 520 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 HERC3Q15034 1050 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 KIF19Q2TAC6 998 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 OGFOD2Q6N063 350 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 LRRTM4Q86VH4 590 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 AMZ2Q86W34 360 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 TCAIMQ8N3R3 496 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 MED8Q96G25 268 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 ACTR8Q9H981 624 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 SLC7A8Q9UHI5 535 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 CFAP20Q9Y6A4 193 aaKnown RBP17.91■□□□□ 0.46
USP39-201ENST00000323701 KCNE1BA0A087WTH5 132 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 H0Y8X5 98 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 MANBAO00462 879 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 LSM1O15116 133 aaKnown RBP17.91■□□□□ 0.46
USP39-201ENST00000323701 PDE5AO76074 875 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 CLDN9O95484 217 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 C7P10643 843 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 SRFP11831 508 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 IL9P15248 144 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 RPL10P27635 214 aaKnown RBP17.91■□□□□ 0.46
USP39-201ENST00000323701 NEK2P51955 445 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 CDC16Q13042 620 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 TDGQ13569 410 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 DNAL1Q4LDG9 190 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 RFTN2Q52LD8 501 aaPredicted RBP17.91■□□□□ 0.46
USP39-201ENST00000323701 DSELQ8IZU8 1212 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 ZNF480Q8WV37 535 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 HMGB4Q8WW32 186 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 HLA-CQ95604 372 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 CCDC138Q96M89 665 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 CAAP1Q9H8G2 361 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 SDR39U1Q9NRG7 319 aaPredicted RBP17.91■□□□□ 0.46
USP39-201ENST00000323701 DNAJC11Q9NVH1 559 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 TRPS1Q9UHF7 1281 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 FZD4Q9ULV1 537 aa17.91■□□□□ 0.46
USP39-201ENST00000323701 LAMA1P25391 3075 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 PABPN1LA6NDY0 278 aaKnown RBP17.9■□□□□ 0.46
USP39-201ENST00000323701 CEACAM5P06731 702 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 ZFP36L2P47974 494 aaKnown RBP17.9■□□□□ 0.46
USP39-201ENST00000323701 KPNB1Q14974 876 aaKnown RBP17.9■□□□□ 0.46
USP39-201ENST00000323701 CHST15Q7LFX5 561 aaPredicted RBP17.9■□□□□ 0.46
USP39-201ENST00000323701 EFL1Q7Z2Z2 1120 aaKnown RBP17.9■□□□□ 0.46
USP39-201ENST00000323701 THOC6Q86W42 341 aaKnown RBP17.9■□□□□ 0.46
USP39-201ENST00000323701 SCUBE1Q8IWY4 988 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 RNF175Q8N4F7 328 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 MAGEC3Q8TD91 643 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 MMADHCQ9H3L0 296 aaPredicted RBP17.9■□□□□ 0.46
USP39-201ENST00000323701 SLC2A4RGQ9NR83 387 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 ZNF490Q9ULM2 529 aaPredicted RBP17.9■□□□□ 0.46
USP39-201ENST00000323701 SH2B3Q9UQQ2 575 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 VPS4BO75351 444 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 MYCLP1P12525 358 aaPredicted RBP17.9■□□□□ 0.46
USP39-201ENST00000323701 GLULP15104 373 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 ATP4BP51164 291 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 RAP1GDS1P52306 607 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 RIPK1Q13546 671 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 TPRG1LQ5T0D9 272 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 USP30Q70CQ3 517 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 OR5AR1Q8NGP9 310 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 FOPNLQ96NB1 174 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 GUCD1Q96NT3 240 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 DPEP2Q9H4A9 486 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 PREBQ9HCU5 417 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 AIG1Q9NVV5 245 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 PLAGL1Q9UM63 463 aa17.9■□□□□ 0.46
USP39-201ENST00000323701 E7EQ34 232 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 ULK1O75385 1050 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 WFS1O76024 890 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 ACADMP11310 421 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 MAP7D1Q3KQU3 841 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 EOGTQ5NDL2 527 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 WLSQ5T9L3 541 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 PTCRAQ6ISU1 281 aaPredicted RBP17.89■□□□□ 0.45
USP39-201ENST00000323701 RETREG3Q86VR2 466 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms