RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 GMEB2Q9UKD1 530 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 TNPO3Q9Y5L0 923 aaKnown RBP13.23□□□□□ -0.29
PRPF18-201ENST00000320054 GOLGA4Q13439 2230 aaKnown RBP13.23□□□□□ -0.29
PRPF18-201ENST00000320054 GPR179Q6PRD1 2367 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 WDR87Q6ZQQ6 2873 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 PCDHGA12O60330 932 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 LRP3O75074 770 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 GUCA1CO95843 209 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 VIPP01282 170 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 ZNF806P0C7X5 589 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 ZNF883P0CG24 379 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 GIMD1P0DJR0 217 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 ERGP11308 486 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 FGF3P11487 239 aaPredicted RBP13.22□□□□□ -0.29
PRPF18-201ENST00000320054 ENGP17813 658 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 HERVK_113P63132 956 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 PCBP2Q15366 365 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRPF18-201ENST00000320054 PDK4Q16654 411 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 DEFB133Q30KQ1 61 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 SLC9B2Q86UD5 537 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 TRIM48Q8IWZ4 208 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 GPR156Q8NFN8 814 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 OR6Y1Q8NGX8 325 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 MAPK15Q8TD08 544 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 SLC37A2Q8TED4 501 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 DYDC1Q8WWB3 177 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 CKAP2Q8WWK9 683 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 ATOH1Q92858 354 aaPredicted RBP13.22□□□□□ -0.29
PRPF18-201ENST00000320054 HGH1Q9BTY7 390 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 MECRQ9BV79 373 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 RAB11FIP5Q9BXF6 653 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 ERVK-6Q9BXR3 956 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 SLC40A1Q9NP59 571 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 NLGN3Q9NZ94 848 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 STOX2Q9P2F5 926 aaPredicted RBP13.22□□□□□ -0.29
PRPF18-201ENST00000320054 CPNE7Q9UBL6 633 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 TDRKHQ9Y2W6 561 aaKnown RBP13.22□□□□□ -0.29
PRPF18-201ENST00000320054 LAMA1P25391 3075 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 OTOGLQ3ZCN5 2332 aa13.22□□□□□ -0.29
PRPF18-201ENST00000320054 SNRNP200O75643 2136 aaKnown RBP13.21□□□□□ -0.29
PRPF18-201ENST00000320054 VPS13AQ96RL7 3174 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 COL5A1P20908 1838 aaPredicted RBP13.21□□□□□ -0.29
PRPF18-201ENST00000320054 WDR91A4D1P6 747 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 NCF1BA6NI72 391 aaPredicted RBP13.21□□□□□ -0.29
PRPF18-201ENST00000320054 ZNF839A8K0R7 811 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 NCF1CA8MVU1 366 aaPredicted RBP13.21□□□□□ -0.29
PRPF18-201ENST00000320054 B4DGG1 531 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 DLL1O00548 723 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 KLF11O14901 512 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 TAPBPO15533 448 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 NOBOXO60393 691 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 SLC16A8O95907 504 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 RPS17P08708 135 aaKnown RBP13.21□□□□□ -0.29
PRPF18-201ENST00000320054 ALPPL2P10696 532 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 NCF1P14598 390 aaPredicted RBP13.21□□□□□ -0.29
PRPF18-201ENST00000320054 GRK2P25098 689 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 IMPA1P29218 277 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 FASLGP48023 281 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 SLC6A12P48065 614 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 PRKG2Q13237 762 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 CYP2A13Q16696 494 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 ZNF678Q5SXM1 525 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.21□□□□□ -0.29
PRPF18-201ENST00000320054 ANKS6Q68DC2 871 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 AGTRAPQ6RW13 159 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 MBOAT1Q6ZNC8 495 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 RAB42Q8N4Z0 105 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 OR56A3Q8NH54 315 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 HMGCLL1Q8TB92 370 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 ZNF480Q8WV37 535 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 PATE1Q8WXA2 126 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 PHF21BQ96EK2 531 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 MAGEB18Q96M61 343 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 TMEM237Q96Q45 408 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 TMEM79Q9BSE2 394 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 MENTQ9BUN1 341 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 DUSP23Q9BVJ7 150 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 CD244Q9BZW8 370 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 STN1Q9H668 368 aaKnown RBP13.21□□□□□ -0.29
PRPF18-201ENST00000320054 CCDC134Q9H6E4 229 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 UCK1Q9HA47 277 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 IL21RQ9HBE5 538 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 WWOXQ9NZC7 414 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 LNPEPQ9UIQ6 1025 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 PCDHGB2Q9Y5G2 931 aa13.21□□□□□ -0.29
PRPF18-201ENST00000320054 TRBV23OR9-2A0A075B6M9 112 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 POLR3GO15318 223 aaPredicted RBP13.2□□□□□ -0.3
PRPF18-201ENST00000320054 NPHS1O60500 1241 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 STK16O75716 305 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 SERPINE1P05121 402 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 NEFHP12036 1026 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 BGNP21810 368 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 EEF1DP29692 281 aaKnown RBP13.2□□□□□ -0.3
PRPF18-201ENST00000320054 PKLRP30613 574 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 SHMT2P34897 504 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 SERPINB5P36952 375 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 RAB28P51157 221 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 PNLIPRP1P54315 467 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms