RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ERRFI1Q9UJM3 462 aaPredicted RBP13.73□□□□□ -0.21
RPP40-201ENST00000319533 GUCA1BQ9UMX6 200 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 PACSIN2Q9UNF0 486 aaPredicted RBP13.73□□□□□ -0.21
RPP40-201ENST00000319533 CAPN6Q9Y6Q1 641 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 CREBBPQ92793 2442 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 POLEQ07864 2286 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 CELSR2Q9HCU4 2923 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 LIN7AO14910 233 aaPredicted RBP13.72□□□□□ -0.21
RPP40-201ENST00000319533 CNOT3O75175 753 aaKnown RBP13.72□□□□□ -0.21
RPP40-201ENST00000319533 IPO13O94829 963 aaKnown RBP13.72□□□□□ -0.21
RPP40-201ENST00000319533 CLDN1O95832 211 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 ALPPP05187 535 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 CCDC175P0C221 793 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 PRSS56P0CW18 603 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 UGT2B7P16662 529 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 GCGRP47871 477 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 DCDP81605 110 aaKnown RBP13.72□□□□□ -0.21
RPP40-201ENST00000319533 CACNG1Q06432 222 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 RAPSNQ13702 412 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 NR6A1Q15406 480 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 DBN1Q16643 649 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 ZRANB3Q5FWF4 1079 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 MLIPQ5VWP3 458 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 AADACL2Q6P093 401 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 PPP1R32Q7Z5V6 425 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 PIANPQ8IYJ0 282 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 TBC1D21Q8IYX1 336 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 GALNT16Q8N428 558 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 DNAJC22Q8N4W6 341 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 CLEC1AQ8NC01 280 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 OR5AR1Q8NGP9 310 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 CCDC110Q8TBZ0 833 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 NACC2Q96BF6 587 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 PTERQ96BW5 349 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 CDKN2AIPNLQ96HQ2 116 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 ALS2CR12Q96Q35 445 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 AP1M1Q9BXS5 423 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 ASF1BQ9NVP2 202 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 P4HTMQ9NXG6 502 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 OR6C2Q9NZP2 312 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 POLG2Q9UHN1 485 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 SRPK3Q9UPE1 567 aa13.72□□□□□ -0.21
RPP40-201ENST00000319533 PTRH2Q9Y3E5 179 aaKnown RBP13.72□□□□□ -0.21
RPP40-201ENST00000319533 ANKRD12Q6UB98 2062 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 CACNA1DQ01668 2161 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 A1L4Q6 167 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 QSOX1O00391 747 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 PEX12O00623 359 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 ONECUT2O95948 504 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 UMODP07911 640 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 CHRM5P08912 532 aaPredicted RBP13.71□□□□□ -0.21
RPP40-201ENST00000319533 FOLR3P41439 243 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 NSG1P42857 185 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 SPARCL1Q14515 664 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 ITIH4Q14624 930 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 SLC5A12Q1EHB4 618 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 SEL1L2Q5TEA6 688 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 TLDC1Q6P9B6 456 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 PACS1Q6VY07 963 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 Q6ZS92 163 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 MICALCLQ6ZW33 695 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 TRIM73Q86UV7 250 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 HOOK3Q86VS8 718 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 CISD2Q8N5K1 135 aaKnown RBP13.71□□□□□ -0.21
RPP40-201ENST00000319533 OR5K2Q8NHB8 316 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 STYXQ8WUJ0 223 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 INPP5DQ92835 1189 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 LRRC45Q96CN5 670 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 HES6Q96HZ4 224 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 RANBP9Q96S59 729 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 FAM118BQ9BPY3 351 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 ENAMQ9NRM1 1142 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 SPHK1Q9NYA1 384 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 IFT80Q9P2H3 777 aaPredicted RBP13.71□□□□□ -0.21
RPP40-201ENST00000319533 GPN3Q9UHW5 284 aaPredicted RBP13.71□□□□□ -0.21
RPP40-201ENST00000319533 SLC5A6Q9Y289 635 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 ASF1AQ9Y294 204 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 PRSS21Q9Y6M0 314 aa13.71□□□□□ -0.21
RPP40-201ENST00000319533 PCM1Q15154 2024 aa13.71□□□□□ -0.22
RPP40-201ENST00000319533 CCDC88CQ9P219 2028 aa13.71□□□□□ -0.22
RPP40-201ENST00000319533 A0A0J9YY10 115 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 SLC5A10A0PJK1 596 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 MROH6A6NGR9 719 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 BHMG1C9JSJ3 638 aaPredicted RBP13.7□□□□□ -0.22
RPP40-201ENST00000319533 ZSCAN9O15535 394 aaPredicted RBP13.7□□□□□ -0.22
RPP40-201ENST00000319533 AP2A1O95782 977 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 CTSBP07858 339 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 DCTP40126 519 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 PLOD1Q02809 727 aaPredicted RBP13.7□□□□□ -0.22
RPP40-201ENST00000319533 KYNUQ16719 465 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 PARP6Q2NL67 630 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 NKAIN1Q4KMZ8 207 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 C1orf189Q5VU69 101 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 LYPLAL1Q5VWZ2 237 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 TAS2R42Q7RTR8 314 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 TM9SF4Q92544 642 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 N4BP2L2Q92802 583 aaPredicted RBP13.7□□□□□ -0.22
RPP40-201ENST00000319533 LZTFL1Q9NQ48 299 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 SLC22A11Q9NSA0 550 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms