RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 FBXL8Q96CD0 374 aa17.9■□□□□ 0.46
CCDC43-201ENST00000315286 KLHL4Q9C0H6 718 aa17.9■□□□□ 0.46
CCDC43-201ENST00000315286 COPS7BQ9H9Q2 264 aaPredicted RBP17.9■□□□□ 0.46
CCDC43-201ENST00000315286 LRTM1Q9HBL6 345 aa17.9■□□□□ 0.46
CCDC43-201ENST00000315286 DNAJC11Q9NVH1 559 aa17.9■□□□□ 0.46
CCDC43-201ENST00000315286 PCDHA9Q9Y5H5 950 aa17.9■□□□□ 0.46
CCDC43-201ENST00000315286 PRSS51A0A1B0GVH4 220 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 SEC22BO75396 215 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 PSMC3P17980 439 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 P2RY2P41231 377 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 PTGR1Q14914 329 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 SFT2D3Q587I9 215 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 SLC2A7Q6PXP3 512 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 DSG4Q86SJ6 1040 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 LILRA2Q8N149 483 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 N4BP2L2Q92802 583 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-201ENST00000315286 ACPTQ9BZG2 426 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 OR2AG1Q9H205 316 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 EPHX3Q9H6B9 360 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 CIDEBQ9UHD4 219 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 EIF3LQ9Y262 564 aaKnown RBP17.89■□□□□ 0.45
CCDC43-201ENST00000315286 C1QTNF3-AMACRE9PGA6 284 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 LILRB5O75023 590 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 C8BP07358 591 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 NEK2P51955 445 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 RHDQ02161 417 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 DPTQ07507 201 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 CNTN1Q12860 1018 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 SMU1Q2TAY7 513 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 GGTA1PQ4G0N0 100 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 ZNF658BQ4V348 819 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-201ENST00000315286 ANO7Q6IWH7 933 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 PARM1Q6UWI2 310 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 SLC22A15Q8IZD6 547 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 L3MBTL4Q8NA19 623 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 SELENOMQ8WWX9 145 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 FGF14Q92915 247 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 TMEM125Q96AQ2 219 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 RPP25Q9BUL9 199 aaKnown RBP17.89■□□□□ 0.45
CCDC43-201ENST00000315286 RIMS3Q9UJD0 308 aa17.89■□□□□ 0.45
CCDC43-201ENST00000315286 ATG2BQ96BY7 2078 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 HSD17B1P14061 328 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 JAK1P23458 1154 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 GDI1P31150 447 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 WASP42768 502 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 BDKRB1P46663 353 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 DGKQP52824 942 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 MAD2L1Q13257 205 aaPredicted RBP17.88■□□□□ 0.45
CCDC43-201ENST00000315286 PLA2G4EQ3MJ16 856 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 RABL3Q5HYI8 236 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 DHFR2Q86XF0 187 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 PDSS2Q86YH6 399 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 KIAA2013Q8IYS2 634 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 LRGUKQ96M69 825 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 PKP2Q99959 881 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 HDAC8Q9BY41 377 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 VCX3BQ9H321 246 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 INTS7Q9NVH2 962 aaKnown RBP17.88■□□□□ 0.45
CCDC43-201ENST00000315286 C1orf109Q9NX04 203 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 SNX6Q9UNH7 406 aa17.88■□□□□ 0.45
CCDC43-201ENST00000315286 TCRBV3S1A0A5B6 114 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 GRIA2P42262 883 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 ADGRE1Q14246 886 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 KIAA0040Q15053 153 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 RAB30Q15771 203 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 BCL7AQ4VC05 210 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 ATAT1Q5SQI0 421 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 OGFRL1Q5TC84 451 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-201ENST00000315286 TRAPPC5Q8IUR0 188 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 HOMEZQ8IX15 550 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 CFAP206Q8IYR0 622 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 LIX1Q8N485 282 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 ELOVL6Q9H5J4 265 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 TRIM39Q9HCM9 518 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 ATXN10Q9UBB4 475 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 FADS3Q9Y5Q0 445 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 DYTNA2CJ06 578 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 EIF4E1BA6NMX2 242 aaKnown RBP17.87■□□□□ 0.45
CCDC43-201ENST00000315286 RNASEH2AO75792 299 aaKnown RBP17.87■□□□□ 0.45
CCDC43-201ENST00000315286 CATP04040 527 aaKnown RBP17.87■□□□□ 0.45
CCDC43-201ENST00000315286 VARSP26640 1264 aaKnown RBP17.87■□□□□ 0.45
CCDC43-201ENST00000315286 EIF2DP41214 584 aaKnown RBP17.87■□□□□ 0.45
CCDC43-201ENST00000315286 HALP42357 657 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 CHIT1Q13231 466 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 PIP5KL1Q5T9C9 394 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 AGTRAPQ6RW13 159 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 SUSD1Q6UWL2 747 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 CACUL1Q86Y37 369 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 DPP10Q8N608 796 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 CXorf40AQ8TE69 158 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 CCDC138Q96M89 665 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 ZCCHC2Q9C0B9 1178 aaKnown RBP17.87■□□□□ 0.45
CCDC43-201ENST00000315286 STOX2Q9P2F5 926 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-201ENST00000315286 EGFL7Q9UHF1 273 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 STON1Q9Y6Q2 735 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 TRPM6Q9BX84 2022 aa17.87■□□□□ 0.45
CCDC43-201ENST00000315286 H3BM21 787 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 ARNTLO00327 626 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 NPC1O15118 1278 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 PEX1O43933 1283 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms