RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 AREL1O15033 823 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 INSIG1O15503 277 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 TPD52L2O43399 206 aaKnown RBP13.16□□□□□ -0.3
SKA3-202ENST00000314759 KCNK2O95069 426 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 IL6P05231 212 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 ITGAMP11215 1152 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 CYP4B1P13584 511 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 MASP1P48740 699 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 HSPA7P48741 367 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 RFX4Q33E94 735 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 AKAP14Q86UN6 197 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 SLC22A15Q8IZD6 547 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 LIX1Q8N485 282 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 REXO5Q96IC2 774 aaKnown RBP13.16□□□□□ -0.3
SKA3-202ENST00000314759 SH3GL1Q99961 368 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 SPON2Q9BUD6 331 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 CINPQ9BW66 212 aaPredicted RBP13.16□□□□□ -0.3
SKA3-202ENST00000314759 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
SKA3-202ENST00000314759 TRBV5-3A0A0A0MS03 114 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 FFAR2O15552 330 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 GUCA1CO95843 209 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 JUNDP17535 347 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 TACR2P21452 398 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 IGFBP5P24593 272 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 ALDH7A1P49419 539 aaKnown RBP13.15□□□□□ -0.3
SKA3-202ENST00000314759 GBX1Q14549 363 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 MORN1Q5T089 497 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 SYT6Q5T7P8 510 aaPredicted RBP13.15□□□□□ -0.3
SKA3-202ENST00000314759 CPZQ66K79 652 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 SUSD1Q6UWL2 747 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 CCDC81Q6ZN84 652 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 LRRC8DQ7L1W4 858 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 EFHBQ8N7U6 833 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 FBXO32Q969P5 355 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 OR52E6Q96RD3 313 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 CLMPQ9H6B4 373 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 ELOVL2Q9NXB9 296 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 PKP3Q9Y446 797 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 COMMD10Q9Y6G5 202 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 TAPBPO15533 448 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 SEC24AO95486 1093 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 PTPN2P17706 415 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 CR2P20023 1033 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 GDF5P43026 501 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 GZMMP51124 257 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 MAP2K5Q13163 448 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 CLCA4Q14CN2 919 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 CLPPQ16740 277 aaPredicted RBP13.15□□□□□ -0.3
SKA3-202ENST00000314759 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
SKA3-202ENST00000314759 CES5AQ6NT32 575 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 TAS2R42Q7RTR8 314 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 PLPP6Q8IY26 295 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 ATAD1Q8NBU5 361 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 CLHC1Q8NHS4 586 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 RHOXF1Q8NHV9 184 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 PHF10Q8WUB8 498 aaKnown RBP13.15□□□□□ -0.3
SKA3-202ENST00000314759 PYURFQ96I23 114 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 UROC1Q96N76 676 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 CLSTN3Q9BQT9 956 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 SLIRPQ9GZT3 109 aaKnown RBP13.15□□□□□ -0.3
SKA3-202ENST00000314759 PRDM8Q9NQV8 689 aa13.15□□□□□ -0.3
SKA3-202ENST00000314759 ANKRD34BA5PLL1 514 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 RGS14O43566 566 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 NUAK1O60285 661 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 ESR1P03372 595 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 PSMB9P28065 219 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 SERPINB10P48595 397 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 CLK3P49761 638 aaKnown RBP13.14□□□□□ -0.31
SKA3-202ENST00000314759 KCNQ1P51787 676 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 HUNKP57058 714 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 PHC1P78364 1004 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 MGAT3Q09327 533 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 TAF10Q12962 218 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 CARD16Q5EG05 197 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 SHQ1Q6PI26 577 aaKnown RBP13.14□□□□□ -0.31
SKA3-202ENST00000314759 CEP68Q76N32 757 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 CALHM3Q86XJ0 350 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 LYSMD2Q8IV50 215 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 GLB1L3Q8NCI6 653 aaPredicted RBP13.14□□□□□ -0.31
SKA3-202ENST00000314759 ZNF486Q96H40 463 aaPredicted RBP13.14□□□□□ -0.31
SKA3-202ENST00000314759 PDLIM5Q96HC4 596 aaKnown RBP13.14□□□□□ -0.31
SKA3-202ENST00000314759 DACH2Q96NX9 599 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 PTPN18Q99952 460 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 ADAM2Q99965 735 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 DSN1Q9H410 356 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 RIBC2Q9H4K1 309 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 ZNF408Q9H9D4 720 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 ITM2CQ9NQX7 267 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 IL37Q9NZH6 218 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 UBA2Q9UBT2 640 aaPredicted RBP13.14□□□□□ -0.31
SKA3-202ENST00000314759 DHRS7Q9Y394 339 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 ARIH1Q9Y4X5 557 aaPredicted RBP13.14□□□□□ -0.31
SKA3-202ENST00000314759 PLXNA3P51805 1871 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 ANKRD66B4E2M5 251 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 SNPHO15079 494 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 STX7O15400 261 aaKnown RBP13.14□□□□□ -0.31
SKA3-202ENST00000314759 OAZ2O95190 189 aa13.14□□□□□ -0.31
SKA3-202ENST00000314759 EIF2DP41214 584 aaKnown RBP13.14□□□□□ -0.31
SKA3-202ENST00000314759 PTGER3P43115 390 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms