RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 GATA5Q9BWX5 397 aaPredicted RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 MCUBQ9NWR8 336 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 GJD2Q9UKL4 321 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 ADAMTS6Q9UKP5 1117 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 SSR3Q9UNL2 185 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 FER1L6Q2WGJ9 1857 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 TNS1Q9HBL0 1735 aaKnown RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3DA0A087WVF3 549 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3IA0A087WXS9 549 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3EA0A087X179 549 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3KA0A087X1G2 549 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3FA6NER0 549 aaPredicted RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3LB9A6J9 549 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 BCKDKO14874 412 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 OR7A10O76100 309 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3HP0C7X1 549 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 HGFP14210 728 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 DGKAP23743 735 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 HTR2BP41595 481 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 MTHFRP42898 656 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 CRATP43155 626 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 IRF9Q00978 393 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 CDK18Q07002 472 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 HNRNPDQ14103 355 aaKnown RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 SNAPC1Q16533 368 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SYT16Q17RD7 645 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 RFX4Q33E94 735 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 LIPMQ5VYY2 423 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3GQ6DHY5 549 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3CQ6IPX1 549 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 ASRGL1Q7L266 308 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBC1D3Q8IZP1 549 aaPredicted RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 VPS35Q96QK1 796 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 CCDC177Q9NQR7 707 aaPredicted RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 ENOPH1Q9UHY7 261 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 MAPRE3Q9UPY8 281 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 WWP2O00308 870 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 PLD2O14939 933 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 HLA-DQB2P05538 268 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 PSKH1P11801 424 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TFEBP19484 476 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TBRG1Q3YBR2 411 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 ANKDD1AQ495B1 522 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 KIAA0319Q5VV43 1072 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 CDYL2Q8N8U2 506 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 FUBP3Q96I24 572 aaKnown RBP eCLIP9.11□□□□□ -0.95
XCR1-201ENST00000309285 PHOX2BQ99453 314 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 MIPEPQ99797 713 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SLC25A51Q9H1U9 297 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 EXD2Q9NVH0 621 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 POLR3BQ9NW08 1133 aaPredicted RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 EIF3KQ9UBQ5 218 aaKnown RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 TCAF1Q9Y4C2 921 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 HS3ST4Q9Y661 456 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TTC24A2A3L6 582 aaPredicted RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 METTL21EPA6NDL7 271 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 PEX14O75381 377 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 HLA-DQA2P01906 255 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 DLDP09622 509 aaKnown RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 EPORP19235 508 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 TAS2R39P59534 338 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SULT2A1Q06520 285 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 RBBP4Q09028 425 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SLC10A7Q0GE19 358 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 ARL13AQ5H913 290 aaPredicted RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 TCEAL5Q5H9L2 206 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 CGB2Q6NT52 195 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 DEPDC4Q8N2C3 294 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 LEMD2Q8NC56 503 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 ZNF671Q8TAW3 534 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 ZNF778Q96MU6 729 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 FCRL3Q96P31 734 aaPredicted RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 EXO5Q9H790 373 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SRRDQ9UH36 339 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 CDC14AQ9UNH5 594 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 BTRCQ9Y297 605 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SAMHD1Q9Y3Z3 626 aaKnown RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 OR10H1Q9Y4A9 318 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 GSAPA4D1B5 854 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SLC22A1O15245 554 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 AP2A2O94973 939 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 INHAP05111 366 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SLC15A1P46059 708 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 RPL26P61254 145 aaKnown RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 LSM12Q3MHD2 195 aaKnown RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 PRSS55Q6UWB4 352 aaPredicted RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 ZNF781Q8N8C0 355 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 GOLM1Q8NBJ4 401 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 STAG3L4Q8TBR4 150 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 FCRL5Q96RD9 977 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 WDR83Q9BRX9 315 aaKnown RBP9.11□□□□□ -0.95
XCR1-201ENST00000309285 UNC93B1Q9H1C4 597 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SMOC2Q9H3U7 446 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 ATP13A3Q9H7F0 1226 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 BRD9Q9H8M2 597 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 NMUR1Q9HB89 426 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SLC35C2Q9NQQ7 365 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 RNF186Q9NXI6 227 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 ASF1AQ9Y294 204 aa9.11□□□□□ -0.95
XCR1-201ENST00000309285 SLC25A14O95258 325 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms