RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TPST2O60704 377 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 NRF1Q16656 503 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 THOC6Q86W42 341 aaKnown RBP10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 RALGPS2Q86X27 583 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 HEBP1Q9NRV9 189 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 DKKL1Q9UK85 242 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 LCA5LO95447 670 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 CD247P20963 164 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC7A2P52569 658 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 CEP78Q5JTW2 689 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 FAM182AQ5T1J6 154 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 UXS1Q8NBZ7 420 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 RCN3Q96D15 328 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 GJD2Q9UKL4 321 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 OR1A2Q9Y585 309 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 OAZ2O95190 189 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 THEGLP0DJG4 465 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC30A6Q6NXT4 461 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 SMPDL3AQ92484 453 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 PTCD3Q96EY7 689 aaKnown RBP10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 ART5Q96L15 291 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 LINC00597Q9H2U6 94 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 MMADHCQ9H3L0 296 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 AP4S1Q9Y587 144 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 CST5P28325 142 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 USP46P62068 366 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 ZIK1Q3SY52 487 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 IZUMO2Q6UXV1 221 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 IGSF8Q969P0 613 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 LRRC46Q96FV0 321 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 IFT80Q9P2H3 777 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 FAM86C2PA6NEL3 165 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 PLK4O00444 970 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 IL33O95760 270 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 ITGBL1O95965 494 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 SHHQ15465 462 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 CRTC1Q6UUV9 634 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 FAM92BQ6ZTR7 304 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 Q6ZVL8 140 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 NUDT13Q86X67 352 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 OR9A1PQ8NGU1 263 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 HM13Q8TCT9 377 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 PYDC1Q8WXC3 89 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 CMTM7Q96FZ5 175 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 NPY6RQ99463 290 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 CALML5Q9NZT1 146 aa10.48□□□□□ -0.73
SYNPO2-201ENST00000307142 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 PTGESO14684 152 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 RPS15P62841 145 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 LRIG1Q96JA1 1093 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 LENG8Q96PV6 779 aaPredicted RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 OLFM1Q99784 485 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 FBRSQ9HAH7 460 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 DOCK2Q92608 1830 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 VEGFDO43915 354 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 PCDHGA12O60330 932 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 DHRSXQ8N5I4 330 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 CPSF7Q8N684 471 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 RBCK1Q9BYM8 510 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 SAR1AQ9NR31 198 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 SDHAF3Q9NRP4 125 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 SNX7Q9UNH6 387 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 RUVBL1Q9Y265 456 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 GMPPBQ9Y5P6 360 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 SERPINA6P08185 405 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 FBLP22087 321 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 ACTR3P61158 418 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 IRF9Q00978 393 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 RING1Q06587 406 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 PAFAH1B3Q15102 231 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 KIAA1161Q6NSJ0 714 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 RABEPKQ7Z6M1 372 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 DCUN1D3Q8IWE4 304 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 TMEM130Q8N3G9 435 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 ZDHHC1Q8WTX9 485 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 DLG3Q92796 817 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 WDR55Q9H6Y2 383 aaPredicted RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 SHMT2P34897 504 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 GRK6P43250 576 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 KIAA2013Q8IYS2 634 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 PIK3C3Q8NEB9 887 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 PRDM8Q9NQV8 689 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 MARF1Q9Y4F3 1742 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 IGKV6D-21A0A0A0MT36 114 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 F7P08709 466 aaPredicted RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 ACADSP16219 412 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC25A11Q02978 314 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 SEMA3AQ14563 771 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 TXNRD3NBQ6F5E7 133 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 SPESP1Q6UW49 350 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 FAM81AQ8TBF8 368 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 GPER1Q99527 375 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 PDLIM7Q9NR12 457 aa10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 SAMD4AQ9UPU9 718 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-201ENST00000307142 IQCMA0A1B0GVH7 501 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 LIN7AO14910 233 aaPredicted RBP10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 TULP3O75386 442 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 ALOX5P09917 674 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 HOXD13P35453 343 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 EIF4HQ15056 248 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms