RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 AARSD1Q9BTE6 412 aaKnown RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 TAS2R16Q9NYV7 291 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 EHD3Q9NZN3 535 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 MAP1BP46821 2468 aaKnown RBP14.27□□□□□ -0.12
PTPN9-201ENST00000306726 ABHD14A-ACY1A0A1B0GW23 586 aa14.27□□□□□ -0.12
PTPN9-201ENST00000306726 LOC730098B7Z3J9 87 aa14.27□□□□□ -0.12
PTPN9-201ENST00000306726 INPPL1O15357 1258 aa14.27□□□□□ -0.12
PTPN9-201ENST00000306726 MBL2P11226 248 aaPredicted RBP14.27□□□□□ -0.12
PTPN9-201ENST00000306726 KCNE1P15382 129 aa14.27□□□□□ -0.12
PTPN9-201ENST00000306726 LRRC26Q2I0M4 334 aa14.27□□□□□ -0.12
PTPN9-201ENST00000306726 CTU2Q2VPK5 515 aaKnown RBP14.27□□□□□ -0.12
PTPN9-201ENST00000306726 NECTIN4Q96NY8 510 aa14.27□□□□□ -0.12
PTPN9-201ENST00000306726 MTIF3Q9H2K0 278 aaKnown RBP14.27□□□□□ -0.12
PTPN9-201ENST00000306726 KRT84Q9NSB2 600 aa14.27□□□□□ -0.12
PTPN9-201ENST00000306726 INTS10Q9NVR2 710 aaKnown RBP14.27□□□□□ -0.12
PTPN9-201ENST00000306726 SPASTQ9UBP0 616 aa14.27□□□□□ -0.12
PTPN9-201ENST00000306726 TBC1D30Q9Y2I9 924 aa14.27□□□□□ -0.12
PTPN9-201ENST00000306726 RFXANKO14593 260 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 RAP2AP10114 183 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 HLCSP50747 726 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 ALDH3A2P51648 485 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 RAB25P57735 213 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 SMARCB1Q12824 385 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 GANABQ14697 944 aaKnown RBP14.27□□□□□ -0.13
PTPN9-201ENST00000306726 TMEM179BQ7Z7N9 219 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 RAB2BQ8WUD1 216 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 KCTD13Q8WZ19 329 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 TMEM203Q969S6 136 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 ZNF385DQ9H6B1 395 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 ZBTB20Q9HC78 741 aaPredicted RBP14.27□□□□□ -0.13
PTPN9-201ENST00000306726 SDR39U1Q9NRG7 319 aaPredicted RBP14.27□□□□□ -0.13
PTPN9-201ENST00000306726 AGO1Q9UL18 857 aaKnown RBP14.27□□□□□ -0.13
PTPN9-201ENST00000306726 CDH23Q9H251 3354 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 ABCB7O75027 752 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 UROSP10746 265 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 DNAJB13P59910 316 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 ERVK-8P63133 956 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 NKG7Q16617 165 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 XKR4Q5GH76 650 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 PRSS55Q6UWB4 352 aaPredicted RBP14.27□□□□□ -0.13
PTPN9-201ENST00000306726 ADHFE1Q8IWW8 467 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 MAELQ96JY0 434 aaKnown RBP14.27□□□□□ -0.13
PTPN9-201ENST00000306726 UROC1Q96N76 676 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 CITED4Q96RK1 184 aa14.27□□□□□ -0.13
PTPN9-201ENST00000306726 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.27□□□□□ -0.13
PTPN9-201ENST00000306726 BBIP1A8MTZ0 92 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 ZNF99A8MXY4 864 aaPredicted RBP14.26□□□□□ -0.13
PTPN9-201ENST00000306726 ACOX3O15254 700 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 HNF4AP41235 474 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 STC1P52823 247 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 SF3B4Q15427 424 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPN9-201ENST00000306726 KIAA0408Q6ZU52 694 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 NLGN4XQ8N0W4 816 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 TANKQ92844 425 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 IMP4Q96G21 291 aaKnown RBP14.26□□□□□ -0.13
PTPN9-201ENST00000306726 ACAT2Q9BWD1 397 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 TMEM161AQ9NX61 479 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 GPR45Q9Y5Y3 372 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 MLYCDO95822 493 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 SERPIND1P05546 499 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 MZF1P28698 734 aaPredicted RBP14.26□□□□□ -0.13
PTPN9-201ENST00000306726 CRATP43155 626 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 ZNF846Q147U1 533 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 KDELC1Q6UW63 502 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 CADM3Q8N126 398 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 UBXN10Q96LJ8 280 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 Q96MT0 163 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 IL4I1Q96RQ9 567 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 MRPL9Q9BYD2 267 aaKnown RBP14.26□□□□□ -0.13
PTPN9-201ENST00000306726 CEP44Q9C0F1 390 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 MFSD1Q9H3U5 465 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 EHD1Q9H4M9 534 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 ZNF638Q14966 1978 aaKnown RBP14.26□□□□□ -0.13
PTPN9-201ENST00000306726 ASNA1O43681 348 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 PRAMEF12O95522 483 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 CSF2P04141 144 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 TAGAPQ8N103 731 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 TTC29Q8NA56 475 aaPredicted RBP14.26□□□□□ -0.13
PTPN9-201ENST00000306726 OR5AK3PQ8NH89 298 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 AMBRA1Q9C0C7 1298 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 ARMC1Q9NVT9 282 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 ERVK13-1Q9NX77 482 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 ALPK2Q86TB3 2170 aa14.26□□□□□ -0.13
PTPN9-201ENST00000306726 PRMT5O14744 637 aaPredicted RBP14.25□□□□□ -0.13
PTPN9-201ENST00000306726 UGT2B4P06133 528 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 LPOP22079 712 aaPredicted RBP14.25□□□□□ -0.13
PTPN9-201ENST00000306726 PHKG1Q16816 387 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 PM20D1Q6GTS8 502 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 GOLGA7Q7Z5G4 137 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 CYP4Z1Q86W10 505 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 NT5C3BQ969T7 300 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 ALOXE3Q9BYJ1 711 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 TRIM54Q9BYV2 358 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 GIMAP4Q9NUV9 329 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 MAGEL2Q9UJ55 1249 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 LRFN2Q9ULH4 789 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 SLC1A7O00341 560 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 PGRP06401 933 aa14.25□□□□□ -0.13
PTPN9-201ENST00000306726 ZNF12P17014 697 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms