RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TCAIMQ8N3R3 496 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 L3MBTL4Q8NA19 623 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 MCOLN3Q8TDD5 553 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 PPP3R2Q96LZ3 170 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 TMEM74Q96NL1 305 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 RPP25Q9BUL9 199 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 TRIM54Q9BYV2 358 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 LMAN2LQ9H0V9 348 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 ACTR8Q9H981 624 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 THG1LQ9NWX6 298 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 THAP10Q9P2Z0 257 aaPredicted RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 BCAP29Q9UHQ4 241 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 CDH7Q9ULB5 785 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 PCYT1BQ9Y5K3 369 aaPredicted RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 MYO9BQ13459 2157 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 PEX1O43933 1283 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 ATG13O75143 517 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 CD22P20273 847 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 CYP2A7P20853 494 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 JAK1P23458 1154 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 P2RY2P41231 377 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 GNPDA1P46926 289 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 AP1S2P56377 157 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 FOXM1Q08050 763 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 BLMHQ13867 455 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 ADGRE1Q14246 886 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 GGTA1PQ4G0N0 100 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 EGFLAMQ63HQ2 1017 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 NANOGP8Q6NSW7 305 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 PRMT9Q6P2P2 845 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 SUSD1Q6UWL2 747 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 TMEM184AQ6ZMB5 413 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 TICAM1Q8IUC6 712 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 ZNF547Q8IVP9 402 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 SLC22A15Q8IZD6 547 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 FGF14Q92915 247 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 FBXL8Q96CD0 374 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 DUS3LQ96G46 650 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 KXD1Q9BQD3 176 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 SLC29A3Q9BZD2 475 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 NANOGQ9H9S0 305 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 DZANK1Q9NVP4 752 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 GID8Q9NWU2 228 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 ZFC3H1O60293 1989 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 SEC22BO75396 215 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 CASP2P42575 452 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 ELP6Q0PNE2 266 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 TMEM52BQ4KMG9 183 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 PARM1Q6UWI2 310 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 ERN2Q76MJ5 926 aaKnown RBP6.37□□□□□ -1.39
USP47-201ENST00000305481 DHFR2Q86XF0 187 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 RNF175Q8N4F7 328 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 DPP10Q8N608 796 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 KRTCAP2Q8N6L1 136 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 PLA2G15Q8NCC3 412 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 GLMNQ92990 594 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 NUS1Q96E22 293 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 OR4K3Q96R72 315 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 OR2AG1Q9H205 316 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 LRTM1Q9HBL6 345 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 EGFL7Q9UHF1 273 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 LEF1Q9UJU2 399 aaPredicted RBP6.37□□□□□ -1.39
USP47-201ENST00000305481 USP22Q9UPT9 525 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 DLGAP4Q9Y2H0 992 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 ARNTLO00327 626 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 QSOX1O00391 747 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 KAT7O95251 611 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 EPHX1P07099 455 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 VARSP26640 1264 aaKnown RBP6.37□□□□□ -1.39
USP47-201ENST00000305481 PBLDP30039 288 aaPredicted RBP6.37□□□□□ -1.39
USP47-201ENST00000305481 BDKRB1P46663 353 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 CLNS1AP54105 237 aaKnown RBP6.37□□□□□ -1.39
USP47-201ENST00000305481 DPTQ07507 201 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 CNTN1Q12860 1018 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 SMU1Q2TAY7 513 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 BCL7AQ4VC05 210 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 USP39Q53GS9 565 aaKnown RBP6.37□□□□□ -1.39
USP47-201ENST00000305481 C2orf27AQ580R0 203 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 PIP5KL1Q5T9C9 394 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 ANKRD54Q6NXT1 300 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 ZNF765Q7L2R6 523 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 LIX1Q8N485 282 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 CPA6Q8N4T0 437 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 GATA6Q92908 595 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 TMEM159Q96B96 161 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 PKP4Q99569 1192 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 CDCA3Q99618 268 aaPredicted RBP6.37□□□□□ -1.39
USP47-201ENST00000305481 EPHX3Q9H6B9 360 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 DNAJC11Q9NVH1 559 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 ASIC5Q9NY37 505 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 STOX2Q9P2F5 926 aaPredicted RBP6.37□□□□□ -1.39
USP47-201ENST00000305481 ATXN10Q9UBB4 475 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 EPS15L1Q9UBC2 864 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 AP4S1Q9Y587 144 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 FADS3Q9Y5Q0 445 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 SLC16A8O95907 504 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 KRT6AP02538 564 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 KRT6BP04259 564 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 BCKDHAP12694 445 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 DRD3P35462 400 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms