RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.36
TRIM35-201ENST00000305364 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 FYNP06241 537 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 EPB42P16452 691 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 EFNA1P20827 205 aaPredicted RBP12.77□□□□□ -0.36
TRIM35-201ENST00000305364 DNAJA1P31689 397 aaKnown RBP12.77□□□□□ -0.36
TRIM35-201ENST00000305364 STC1P52823 247 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 ISL1P61371 349 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 IFITM3Q01628 133 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 LRIT3Q3SXY7 679 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 AGAP6Q5VW22 663 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 PDE12Q6L8Q7 609 aaKnown RBP12.77□□□□□ -0.36
TRIM35-201ENST00000305364 TUBA3EQ6PEY2 450 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 SYCE2Q6PIF2 218 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 GALNT10Q86SR1 603 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 VPS37AQ8NEZ2 397 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 RASSF5Q8WWW0 418 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 AGAP4Q96P64 663 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 CYP2S1Q96SQ9 504 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 NTN4Q9HB63 628 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 ACOT13Q9NPJ3 140 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 SNX6Q9UNH7 406 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 ZFC3H1O60293 1989 aaKnown RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 GREB1LQ9C091 1923 aaPredicted RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 FAM92AA1XBS5 289 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 PAPSS2O95340 614 aaPredicted RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 TSPAN19P0C672 248 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 POU2F1P14859 743 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 OGNP20774 298 aaKnown RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 SCNN1GP51170 649 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 OTUD1Q5VV17 481 aaPredicted RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 PLET1Q6UQ28 207 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 SLC16A12Q6ZSM3 486 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 EIF3MQ7L2H7 374 aaKnown RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 B3GALT6Q96L58 329 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 SLC30A2Q9BRI3 323 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 FAM126AQ9BYI3 521 aaPredicted RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 TIGARQ9NQ88 270 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 VPS4AQ9UN37 437 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 CBX4O00257 560 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 VIPP01282 170 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 EIF2DP41214 584 aaKnown RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 RPP38P78345 283 aaKnown RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 SCN1BQ07699 218 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 RFTN2Q52LD8 501 aaPredicted RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 PNCKQ6P2M8 343 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 KRTCAP2Q8N6L1 136 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 ABCB9Q9NP78 766 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 SNTG1Q9NSN8 517 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 OLA1Q9NTK5 396 aaKnown RBP12.77□□□□□ -0.37
TRIM35-201ENST00000305364 UTS2RQ9UKP6 389 aa12.77□□□□□ -0.37
TRIM35-201ENST00000305364 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
TRIM35-201ENST00000305364 NBNO60934 754 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 CSF2P04141 144 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 CHRM5P08912 532 aaPredicted RBP12.76□□□□□ -0.37
TRIM35-201ENST00000305364 MAPK1P28482 360 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 CLCNKBP51801 687 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 C14orf80Q86SX3 495 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 SYT12Q8IV01 421 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 FAM9CQ8IZT9 166 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 PARP16Q8N5Y8 322 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 SLCO3A1Q9UIG8 710 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 CRLS1Q9UJA2 301 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 CFL2Q9Y281 166 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 LYVE1Q9Y5Y7 322 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 ADM5C9JUS6 153 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 FPR1P21462 350 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 GDF5P43026 501 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 BRCC3P46736 316 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 NFKB2Q00653 900 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 CYP4Z1Q86W10 505 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 DEPDC4Q8N2C3 294 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 PAPD5Q8NDF8 572 aaKnown RBP12.76□□□□□ -0.37
TRIM35-201ENST00000305364 NETO1Q8TDF5 533 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 ZNF583Q96ND8 569 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 HOXD1Q9GZZ0 328 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 FBXO8Q9NRD0 319 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 ADAMTS5Q9UNA0 930 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 IQCF5A8MTL0 148 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 PDE9AO76083 593 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 CHRNB1P11230 501 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 COX7A2P14406 83 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 LPOP22079 712 aaPredicted RBP12.76□□□□□ -0.37
TRIM35-201ENST00000305364 EDNRBP24530 442 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 RYKP34925 604 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 SMARCB1Q12824 385 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 PRSS48Q7RTY5 328 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 OR7G1Q8NGA0 311 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 APOLD1Q96LR9 279 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 VPS35Q96QK1 796 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 ATOH8Q96SQ7 321 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 MBOAT4Q96T53 435 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 TLR8Q9NR97 1041 aaKnown RBP12.76□□□□□ -0.37
TRIM35-201ENST00000305364 AASDHPPTQ9NRN7 309 aa12.76□□□□□ -0.37
TRIM35-201ENST00000305364 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.76□□□□□ -0.37
TRIM35-201ENST00000305364 PTPRFP10586 1907 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 DOCK5Q9H7D0 1870 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 A0A096LPI6 279 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 A0A1B0GTL3 188 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 PLK4O00444 970 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms