RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 HIST1H2AHQ96KK5 128 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 NRTNQ99748 197 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 HIST1H2AJQ99878 128 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 H2AFJQ9BTM1 129 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 RAB11FIP5Q9BXF6 653 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 TRIM54Q9BYV2 358 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 NMRAL1Q9HBL8 299 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 HRASLS2Q9NWW9 162 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 LNPEPQ9UIQ6 1025 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 KRT87PA6NCN2 255 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 MYO1CO00159 1063 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 LTA4HP09960 611 aaKnown RBP23.74■■□□□ 1.39
HOXC9-201ENST00000303450 KRT15P19012 456 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 IRF9Q00978 393 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 PRKAA1Q13131 559 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 CLPPQ16740 277 aaPredicted RBP23.74■■□□□ 1.39
HOXC9-201ENST00000303450 ARMC6Q6NXE6 501 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 ADAMTSL2Q86TH1 951 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 IL17FQ96PD4 163 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 DPYSL5Q9BPU6 564 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 NUDT22Q9BRQ3 303 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 OR6C2Q9NZP2 312 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 IKZF3Q9UKT9 509 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 PDE10AQ9Y233 779 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 OR5K3A6NET4 321 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 D6RAR5 112 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 RFPL1O75677 317 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 MT-ND3P03897 115 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 PKLRP30613 574 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 TSNQ15631 228 aaKnown RBP23.74■■□□□ 1.39
HOXC9-201ENST00000303450 PHKG1Q16816 387 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 FAM83EQ2M2I3 478 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 WDR74Q6RFH5 385 aaPredicted RBP23.74■■□□□ 1.39
HOXC9-201ENST00000303450 SBSNQ6UWP8 590 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 RBM44Q6ZP01 1051 aaKnown RBP23.74■■□□□ 1.39
HOXC9-201ENST00000303450 CENPLQ8N0S6 344 aaPredicted RBP23.74■■□□□ 1.39
HOXC9-201ENST00000303450 IQCKQ8N0W5 287 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 KCTD4Q8WVF5 259 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 ADAMTS14Q8WXS8 1223 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 NXNL1Q96CM4 212 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 CABS1Q96KC9 395 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 PKP4Q99569 1192 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 EURLQ9NYK6 297 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 SPATA7Q9P0W8 599 aa23.74■■□□□ 1.39
HOXC9-201ENST00000303450 NOVA2Q9UNW9 492 aaKnown RBP23.74■■□□□ 1.39
HOXC9-201ENST00000303450 KLHL2O95198 593 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 ENO2P09104 434 aaPredicted RBP23.73■■□□□ 1.39
HOXC9-201ENST00000303450 POLR2CP19387 275 aaPredicted RBP23.73■■□□□ 1.39
HOXC9-201ENST00000303450 CSF2RBP32927 897 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 CFHR1Q03591 330 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 DLG1Q12959 904 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 HES3Q5TGS1 186 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 FRA10AC1Q70Z53 315 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 PLXDC1Q8IUK5 500 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 CYP4X1Q8N118 509 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 MZB1Q8WU39 189 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 MENTQ9BUN1 341 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 TMEM109Q9BVC6 243 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 IGSF5Q9NSI5 407 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 SPEGQ15772 3267 aa23.73■■□□□ 1.39
HOXC9-201ENST00000303450 GSAPA4D1B5 854 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 BTN3A3O00478 584 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 CAPN5O15484 640 aaPredicted RBP23.72■■□□□ 1.39
HOXC9-201ENST00000303450 ANKS6Q68DC2 871 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 IRGCQ6NXR0 463 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 KLC3Q6P597 504 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 TMEM71Q6P5X7 295 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 DGLUCYQ7Z3D6 616 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 ADGRF3Q8IZF5 1079 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 OR2L8Q8NGY9 312 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 KIAA1191Q96A73 305 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 ZDHHC12Q96GR4 267 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 CCDC138Q96M89 665 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 TSNARE1Q96NA8 513 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 ZIM3Q96PE6 472 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 PCMTD2Q9NV79 361 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 ARL15Q9NXU5 204 aa23.72■■□□□ 1.39
HOXC9-201ENST00000303450 UTP6Q9NYH9 597 aaKnown RBP23.72■■□□□ 1.39
HOXC9-201ENST00000303450 MATN2O00339 956 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 SLC16A8O95907 504 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 MT-CO3P00414 261 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 COL6A2P12110 1019 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 HOXB3P14651 431 aaPredicted RBP23.71■■□□□ 1.39
HOXC9-201ENST00000303450 TFEBP19484 476 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 HSD17B2P37059 387 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 AP1S2P56377 157 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 CLDN6P56747 220 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 ZNF844Q08AG5 666 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 ARHGAP19Q14CB8 494 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 KRT71Q3SY84 523 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 CDCP2Q5VXM1 449 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 C2orf73Q8N5S3 287 aaPredicted RBP23.71■■□□□ 1.39
HOXC9-201ENST00000303450 OR4D9Q8NGE8 314 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 ACMSDQ8TDX5 336 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 DENND1AQ8TEH3 1009 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 TGM7Q96PF1 710 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 RAB33BQ9H082 229 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 EPHA6Q9UF33 1036 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 DCHS1Q96JQ0 3298 aa23.71■■□□□ 1.39
HOXC9-201ENST00000303450 PIPSLA2A3N6 862 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms