RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SH3BP5O60239 455 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 ENO2P09104 434 aaPredicted RBP9.21□□□□□ -0.94
RFX3-201ENST00000302303 RBP1P09455 135 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 EPORP19235 508 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 PEBP1P30086 187 aaKnown RBP9.21□□□□□ -0.94
RFX3-201ENST00000302303 GGT5P36269 586 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 AGTR2P50052 363 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 YBX1P67809 324 aaKnown RBP9.21□□□□□ -0.94
RFX3-201ENST00000302303 HHEXQ03014 270 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 TAP2Q03519 686 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 CFHR1Q03591 330 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 PCLAFQ15004 111 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 CYP2A13Q16696 494 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 PERM1Q5SV97 790 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 GUSBP11Q6P575 273 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 TMEM26Q6ZUK4 368 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 PIP4P1Q86T03 277 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 ADAMTSL2Q86TH1 951 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 GPSM1Q86YR5 675 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 ADGRF3Q8IZF5 1079 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 ARMC2Q8NEN0 867 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 HMGCLL1Q8TB92 370 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 MAPK15Q8TD08 544 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 SKA2Q8WVK7 121 aaPredicted RBP9.21□□□□□ -0.94
RFX3-201ENST00000302303 ESAMQ96AP7 390 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 RAD51AP1Q96B01 352 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 FBXL8Q96CD0 374 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 PKNOX2Q96KN3 472 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 FAM111AQ96PZ2 611 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 TMEM79Q9BSE2 394 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 DUSP23Q9BVJ7 150 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 TBC1D10AQ9BXI6 508 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 TRIT1Q9H3H1 467 aaKnown RBP9.21□□□□□ -0.94
RFX3-201ENST00000302303 XKR8Q9H6D3 395 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 UCK1Q9HA47 277 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 TMEM9BQ9NQ34 198 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 INTS7Q9NVH2 962 aaKnown RBP9.21□□□□□ -0.94
RFX3-201ENST00000302303 STOX2Q9P2F5 926 aaPredicted RBP9.21□□□□□ -0.94
RFX3-201ENST00000302303 PADI4Q9UM07 663 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 DOLKQ9UPQ8 538 aa9.21□□□□□ -0.94
RFX3-201ENST00000302303 COL5A1P20908 1838 aaPredicted RBP9.2□□□□□ -0.94
RFX3-201ENST00000302303 GOLGA6L10A6NI86 522 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 A8MT66 165 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 BTN3A3O00478 584 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 NUDT21O43809 227 aaKnown RBP9.2□□□□□ -0.94
RFX3-201ENST00000302303 PRAMEF4O60810 478 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 GUCA1CO95843 209 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 VIPP01282 170 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 CATP04040 527 aaKnown RBP9.2□□□□□ -0.94
RFX3-201ENST00000302303 CKMT1AP12532 417 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 GLB1P16278 677 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 PKLRP30613 574 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 GDF5P43026 501 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 MAPK9P45984 424 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 SLC6A12P48065 614 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 ATXN3P54252 364 aaPredicted RBP9.2□□□□□ -0.94
RFX3-201ENST00000302303 AP1S2P56377 157 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 CCDC153Q494R4 210 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 CDKL4Q5MAI5 379 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 STPG1Q5TH74 334 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 PRAMEF9Q5VWM5 478 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 ZYG11AQ6WRX3 759 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 SLC9B2Q86UD5 537 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 KLHDC8AQ8IYD2 350 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 PPFIBP2Q8ND30 876 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 OR56A3Q8NH54 315 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 MCOLN3Q8TDD5 553 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 CXorf40BQ96DE9 158 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 CCDC138Q96M89 665 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 OR4K3Q96R72 315 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 MECRQ9BV79 373 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 STMN4Q9H169 189 aaPredicted RBP9.2□□□□□ -0.94
RFX3-201ENST00000302303 MED4Q9NPJ6 270 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 ACSS2Q9NR19 701 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 SPHK1Q9NYA1 384 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 LRIT1Q9P2V4 623 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 COPG2Q9UBF2 871 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 POLG2Q9UHN1 485 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 RNF112Q9ULX5 631 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 TDRKHQ9Y2W6 561 aaKnown RBP9.2□□□□□ -0.94
RFX3-201ENST00000302303 HEBP2Q9Y5Z4 205 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 COLEC10Q9Y6Z7 277 aa9.2□□□□□ -0.94
RFX3-201ENST00000302303 ASXL3Q9C0F0 2248 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 NCF1BA6NI72 391 aaPredicted RBP9.19□□□□□ -0.94
RFX3-201ENST00000302303 NCF1CA8MVU1 366 aaPredicted RBP9.19□□□□□ -0.94
RFX3-201ENST00000302303 TM9SF1O15321 606 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 FLRT2O43155 660 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 SIX3O95343 332 aaPredicted RBP9.19□□□□□ -0.94
RFX3-201ENST00000302303 NCF1P14598 390 aaPredicted RBP9.19□□□□□ -0.94
RFX3-201ENST00000302303 SLC2A4P14672 509 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 CPA3P15088 417 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 CYP2A7P20853 494 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 NDUFS1P28331 727 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 ALDH3A1P30838 453 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 ARRB2P32121 409 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 GRK6P43250 576 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 LIMK1P53667 647 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 NFKB2Q00653 900 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 SETDB1Q15047 1291 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 PTCHD3Q3KNS1 767 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms