RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 RFTN2Q52LD8 501 aaPredicted RBP17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 LAIR1Q6GTX8 287 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 CHST9Q7L1S5 443 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 TAS2R42Q7RTR8 314 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 GALNT10Q86SR1 603 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 ANKRD13BQ86YJ7 626 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 SLC22A15Q8IZD6 547 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 CARNMT1Q8N4J0 409 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 NKAPQ8N5F7 415 aaKnown RBP17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 STARD8Q92502 1023 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 BHMTQ93088 406 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 MUL1Q969V5 352 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 ZNF583Q96ND8 569 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 ABCG8Q9H221 673 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 EHD1Q9H4M9 534 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 WDR70Q9NW82 654 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 TRMT6Q9UJA5 497 aaKnown RBP17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 C16orf96A6NNT2 1141 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 PQBP1O60828 265 aaKnown RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 PRAMEF12O95522 483 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 RPS17P08708 135 aaKnown RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 TGM1P22735 817 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 PCYT1AP49585 367 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 TTPAP49638 278 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 PRKG2Q13237 762 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 C10orf111Q8N326 155 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 OVCA2Q8WZ82 227 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 LINGO1Q96FE5 620 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 HHIPL1Q96JK4 782 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 CGREF1Q99674 301 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 CWH43Q9H720 699 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 ZFP14Q9HCL3 533 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 RASSF1Q9NS23 344 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 ZNF99A8MXY4 864 aaPredicted RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 H0Y626 953 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 FFAR3O14843 346 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 GPR42O15529 346 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 GSNP06396 782 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 PCMT1P22061 227 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 HK3P52790 923 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 FOXD4Q12950 439 aaPredicted RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 TUBA3CQ13748 450 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 PHKG1Q16816 387 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 GCNT7Q6ZNI0 430 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 PROSER1Q86XN7 944 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 CD200R1Q8TD46 325 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 FAR1Q8WVX9 515 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 CAPSLQ8WWF8 208 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 HDAC2Q92769 488 aaKnown RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 FAM162AQ96A26 154 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 KLF16Q9BXK1 252 aaPredicted RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 ACTL8Q9H568 366 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 CD274Q9NZQ7 290 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 B3GNT3Q9Y2A9 372 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 PCDHB9Q9Y5E1 797 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 C1QCP02747 245 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 ENO2P09104 434 aaPredicted RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 PSMA3P25788 255 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 EPHA2P29317 976 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 IL2P60568 153 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 ISL1P61371 349 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 NR6A1Q15406 480 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 RBM48Q5RL73 367 aaKnown RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 LETMD1Q6P1Q0 360 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 DEFB128Q7Z7B8 93 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 OR2T12Q8NG77 320 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 ZNF461Q8TAF7 563 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 SLC47A1Q96FL8 570 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 RIBC2Q9H4K1 309 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 ACTR8Q9H981 624 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 SCHIP1Q9P0W5 487 aaPredicted RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 AFF4Q9UHB7 1163 aaKnown RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 VPS4AQ9UN37 437 aa17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 FCF1Q9Y324 198 aaKnown RBP17.43■□□□□ 0.38
TSPAN17-201ENST00000298564 ANKRD36A6QL64 1941 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 E5RI56 91 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 TBL1XO60907 577 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 CAPN1P07384 714 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 ERVPABLB-1P60509 514 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 FOXM1Q08050 763 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 ATXN7L2Q5T6C5 722 aaPredicted RBP17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 TTC23Q5W5X9 447 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 NCEH1Q6PIU2 408 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 NANOGNBQ7Z5D8 188 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 TTC30BQ8N4P2 665 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 SCAIQ8N9R8 606 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 OSBPL10Q9BXB5 764 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 SLC6A13Q9NSD5 602 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 HACD3Q9P035 362 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 PCTPQ9UKL6 214 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 PRMT5O14744 637 aaPredicted RBP17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 MLYCDO95822 493 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 CHEK2O96017 543 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 CTPS1P17812 591 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 VAC14Q08AM6 782 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 SYT16Q17RD7 645 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 GPSM1Q86YR5 675 aa17.42■□□□□ 0.38
TSPAN17-201ENST00000298564 MFSD4AQ8N468 514 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms