RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 AP2A2O94973 939 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PRAMEF12O95522 483 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 GUCA1CO95843 209 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HIST1H2AGP0C0S8 130 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 BCKDHAP12694 445 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 LAG3P18627 525 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HIST1H2ADP20671 130 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 GSTM2P28161 218 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 S100A3P33764 101 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SELPLGQ14242 412 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PLEKHG6Q3KR16 790 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 KCTD8Q6ZWB6 473 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ANKRD33Q7Z3H0 272 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 DDX53Q86TM3 631 aaKnown RBP9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 STK32CQ86UX6 486 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 RGL4Q8IZJ4 473 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SLC39A11Q8N1S5 342 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 LKAAEAR1Q8TD35 194 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 FIG4Q92562 907 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MRPS31Q92665 395 aaKnown RBP9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HIST1H2AHQ96KK5 128 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 FCRL1Q96LA6 429 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HHIPQ96QV1 700 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HIST1H2AJQ99878 128 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 H2AFJQ9BTM1 129 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 BOCQ9BWV1 1114 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 TRIM8Q9BZR9 551 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 GABARAPL1Q9H0R8 117 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MRPL17Q9NRX2 175 aaKnown RBP9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 LIMD1Q9UGP4 676 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SAMD4AQ9UPU9 718 aaKnown RBP9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ERVW-1Q9UQF0 538 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HS3ST2Q9Y278 367 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CPQQ9Y646 472 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PRSS21Q9Y6M0 314 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SCN5AQ14524 2016 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 DENND4CQ5VZ89 1909 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PLXNB3Q9ULL4 1909 aa9.78□□□□□ -0.84
TNFRSF11B-201ENST00000297350 A0A1B0GVG6 124 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 LOC730098B7Z3J9 87 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 H3BMQ9 156 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PER2O15055 1255 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MRPS14O60783 128 aaKnown RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SEC14L2O76054 403 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SEC24DO94855 1032 aaPredicted RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CLDN7O95471 211 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CST1P01037 141 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CYP2A7P20853 494 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 AOAHP28039 575 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SLC6A12P48065 614 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 POLR2LP62875 67 aaKnown RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CSTF3Q12996 717 aaKnown RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PTGR1Q14914 329 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HABP4Q5JVS0 413 aaKnown RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SPANXN4Q5MJ08 99 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 C1orf53Q5VUE5 145 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 FAM117BQ6P1L5 589 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 LINC00299Q6ZSB3 139 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 BEND7Q8N7W2 519 aaPredicted RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 DCBLD1Q8N8Z6 715 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SETD9Q8NE22 299 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ZNF566Q969W8 418 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 FAM120BQ96EK7 910 aaKnown RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ASIC4Q96FT7 647 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 COG8Q96MW5 612 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 TM6SF2Q9BZW4 377 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PAIP1Q9H074 479 aaKnown RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ELOVL6Q9H5J4 265 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 IL21Q9HBE4 155 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ARL15Q9NXU5 204 aa9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 NFKBIL1Q9UBC1 381 aaPredicted RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 FAF1Q9UNN5 650 aaPredicted RBP9.77□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CROCCQ5TZA2 2017 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CFAP99D6REC4 459 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 GNGT2O14610 69 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CREG1O75629 220 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CCNDBP1O95273 360 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ITGAMP11215 1152 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ZNF30P17039 623 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 HOXB9P17482 250 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PRPS1L1P21108 318 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 RYKP34925 604 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 MAGEA2P43356 314 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 RPIAP49247 311 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 EMP3P54852 163 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SRSF11Q05519 484 aaKnown RBP9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 LRRC74AQ0VAA2 488 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PMS2P3Q13401 168 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ARHGEF7Q14155 803 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 C18orf21Q32NC0 220 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 OTUD3Q5T2D3 398 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 TMEM214Q6NUQ4 689 aaKnown RBP9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CNKSR3Q6P9H4 555 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SERPINA11Q86U17 422 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 MSRB3Q8IXL7 192 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 OFCC1Q8IZS5 231 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 OR10A6Q8NH74 314 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 BORCS5Q969J3 196 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 TIFAQ96CG3 184 aa9.77□□□□□ -0.85
TNFRSF11B-201ENST00000297350 MUS81Q96NY9 551 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms