RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 EPORP19235 508 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 MAP4P27816 1152 aaKnown RBP15.15■□□□□ 0.02
LSM6-201ENST00000296581 CPOXP36551 454 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 LEXMQ3ZCV2 418 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 OR52E8Q6IFG1 317 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 OGFOD2Q6N063 350 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 RNF165Q6ZSG1 346 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 KLHDC8AQ8IYD2 350 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 OXR1Q8N573 874 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 DCBLD1Q8N8Z6 715 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 RP9Q8TA86 221 aaKnown RBP15.15■□□□□ 0.02
LSM6-201ENST00000296581 METTL6Q8TCB7 284 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 CCDC138Q96M89 665 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 FOPNLQ96NB1 174 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 C1QTNF7Q9BXJ2 289 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 DPEP2Q9H4A9 486 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 WDR26Q9H7D7 661 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 TRPS1Q9UHF7 1281 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 NCKAP1Q9Y2A7 1128 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 DNMT3AQ9Y6K1 912 aaPredicted RBP15.15■□□□□ 0.02
LSM6-201ENST00000296581 HGFP14210 728 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 CD1EP15812 388 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 LBPP18428 481 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 NDUFV2P19404 249 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 PTK2BQ14289 1009 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 PTCHD3Q3KNS1 767 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 DNAL1Q4LDG9 190 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 FOXB2Q5VYV0 432 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 DOK6Q6PKX4 331 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 LRRTM4Q86VH4 590 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 CFAP61Q8NHU2 1237 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 KLK6Q92876 244 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 TUBGCP3Q96CW5 907 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 CDX2Q99626 313 aaPredicted RBP15.15■□□□□ 0.02
LSM6-201ENST00000296581 PHPT1Q9NRX4 125 aaPredicted RBP15.15■□□□□ 0.02
LSM6-201ENST00000296581 DLGAP2Q9P1A6 1054 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 LOC100653049A0A140TA62 436 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 PRR23AA6NEV1 266 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 KRT34O76011 436 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 ALDOCP09972 364 aaKnown RBP15.14■□□□□ 0.01
LSM6-201ENST00000296581 TCHHL1Q5QJ38 904 aaPredicted RBP15.14■□□□□ 0.01
LSM6-201ENST00000296581 HMGCLL1Q8TB92 370 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 ATL1Q8WXF7 558 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 FOXJ1Q92949 421 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 RTKNQ9BST9 563 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 VCXQ9H320 206 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3DA0A087WVF3 549 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3IA0A087WXS9 549 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3EA0A087X179 549 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3KA0A087X1G2 549 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3FA6NER0 549 aaPredicted RBP15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3LB9A6J9 549 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 MAN2B1O00754 1011 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3HP0C7X1 549 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 ACADMP11310 421 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 MYCLP1P12525 358 aaPredicted RBP15.14■□□□□ 0.01
LSM6-201ENST00000296581 IGFALSP35858 605 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 ARL1P40616 181 aaPredicted RBP15.14■□□□□ 0.01
LSM6-201ENST00000296581 BDKRB1P46663 353 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 RPA4Q13156 261 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 GRB7Q14451 532 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 NFE2L1Q14494 772 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3GQ6DHY5 549 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3CQ6IPX1 549 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 FAM83HQ6ZRV2 1179 aaPredicted RBP15.14■□□□□ 0.01
LSM6-201ENST00000296581 SNX32Q86XE0 403 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 TBC1D3Q8IZP1 549 aaPredicted RBP15.14■□□□□ 0.01
LSM6-201ENST00000296581 PHC3Q8NDX5 983 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 GIMAP2Q9UG22 337 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 OR1A2Q9Y585 309 aa15.14■□□□□ 0.01
LSM6-201ENST00000296581 KRT87PA6NCN2 255 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 MEI4A8MW99 385 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 LOC730098B7Z3J9 87 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 WDR47O94967 919 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 C1orf105O95561 183 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 CD72P21854 359 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 ACADLP28330 430 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 HMOX2P30519 316 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 HTR6P50406 440 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 PFN3P60673 137 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 PPP2CBP62714 309 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 PPP2CAP67775 309 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 CYLC2Q14093 348 aaPredicted RBP15.13■□□□□ 0.01
LSM6-201ENST00000296581 PLA2G4EQ3MJ16 856 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 CCSMST1Q4G0I0 132 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 KIAA1324Q6UXG2 1013 aaKnown RBP15.13■□□□□ 0.01
LSM6-201ENST00000296581 AMZ2Q86W34 360 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 OR2T11Q8NH01 316 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 PKP4Q99569 1192 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 SLC29A3Q9BZD2 475 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 OR52A5Q9H2C5 316 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 DNAJC11Q9NVH1 559 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 RIC8BQ9NVN3 520 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 STOX2Q9P2F5 926 aaPredicted RBP15.13■□□□□ 0.01
LSM6-201ENST00000296581 TCRBV21S2A2A0A5A6 115 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 PSMD12O00232 456 aaPredicted RBP15.13■□□□□ 0.01
LSM6-201ENST00000296581 ACADSP16219 412 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 GABRG2P18507 467 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 ACADVLP49748 655 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 MLF2Q15773 248 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms