RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CLDN7O95471 211 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 CFHP08603 1231 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 BDKRB1P46663 353 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 MTPNP58546 118 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 EIPR1Q53HC9 387 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 TTLQ8NG68 377 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 GPATCH1Q9BRR8 931 aaKnown RBP16.96■□□□□ 0.31
SHANK1-201ENST00000293441 GABRQQ9UN88 632 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 GADD45GO95257 159 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 RB1P06400 928 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 PAX7P23759 505 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 MYLK3Q32MK0 819 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 ZNF776Q68DI1 518 aaPredicted RBP16.96■□□□□ 0.31
SHANK1-201ENST00000293441 CPNE8Q86YQ8 564 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 LRRC17Q8N6Y2 441 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 OR2L5Q8NG80 312 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 S100ZQ8WXG8 99 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 TULP2O00295 520 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 AXIN1O15169 862 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 ATP1B2P14415 290 aaPredicted RBP16.96■□□□□ 0.31
SHANK1-201ENST00000293441 FAUP35544 74 aaKnown RBP16.96■□□□□ 0.31
SHANK1-201ENST00000293441 BTN3A2P78410 334 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 TMEM139Q8IV31 216 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 NIPA2Q8N8Q9 360 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 GIPC3Q8TF64 312 aa16.96■□□□□ 0.31
SHANK1-201ENST00000293441 MON2Q7Z3U7 1717 aa16.96■□□□□ 0.3
SHANK1-201ENST00000293441 NADKO95544 446 aaPredicted RBP16.96■□□□□ 0.3
SHANK1-201ENST00000293441 DBIP07108 87 aaKnown RBP16.96■□□□□ 0.3
SHANK1-201ENST00000293441 ATP5A1P25705 553 aaKnown RBP16.96■□□□□ 0.3
SHANK1-201ENST00000293441 IL1R2P27930 398 aa16.96■□□□□ 0.3
SHANK1-201ENST00000293441 KLF1Q13351 362 aaPredicted RBP16.96■□□□□ 0.3
SHANK1-201ENST00000293441 ZNF792Q3KQV3 632 aa16.96■□□□□ 0.3
SHANK1-201ENST00000293441 GPR33Q49SQ1 333 aa16.96■□□□□ 0.3
SHANK1-201ENST00000293441 SLC22A15Q8IZD6 547 aa16.96■□□□□ 0.3
SHANK1-201ENST00000293441 OR2AJ1Q8NGZ0 328 aa16.96■□□□□ 0.3
SHANK1-201ENST00000293441 FAR1Q8WVX9 515 aa16.96■□□□□ 0.3
SHANK1-201ENST00000293441 PIWIL1Q96J94 861 aaKnown RBP16.96■□□□□ 0.3
SHANK1-201ENST00000293441 TFB2MQ9H5Q4 396 aaKnown RBP16.96■□□□□ 0.3
SHANK1-201ENST00000293441 PCDHB11Q9Y5F2 797 aa16.96■□□□□ 0.3
SHANK1-201ENST00000293441 ADAMDEC1O15204 470 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 HYAL2Q12891 473 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 TLR1Q15399 786 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 PITRM1Q5JRX3 1037 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 BRAT1Q6PJG6 821 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 MBOAT1Q6ZNC8 495 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 SAMD14Q8IZD0 417 aaPredicted RBP16.95■□□□□ 0.3
SHANK1-201ENST00000293441 OR2AP1Q8NGE2 309 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 PMM1Q92871 262 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 RFC2P35250 354 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 ARCN1P48444 511 aaKnown RBP16.95■□□□□ 0.3
SHANK1-201ENST00000293441 STARP49675 285 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 AHSA2Q719I0 299 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 SLCO6A1Q86UG4 719 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 ZNF384Q8TF68 577 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 SLC25A36Q96CQ1 311 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 A0A1W2PRB8 838 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 CAPN8A6NHC0 703 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 IL18R1Q13478 541 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 PCBP2Q15366 365 aaKnown RBP eCLIP16.95■□□□□ 0.3
SHANK1-201ENST00000293441 IFI44LQ53G44 452 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 IQCHQ86VS3 1027 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 CAPSLQ8WWF8 208 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 IFT27Q9BW83 186 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 INSL5Q9Y5Q6 135 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 EME2A4GXA9 379 aaPredicted RBP16.95■□□□□ 0.3
SHANK1-201ENST00000293441 SCELO95171 688 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 NDUFS1P28331 727 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 PPP3R1P63098 170 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 DMPKQ09013 629 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 TWNKQ96RR1 684 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 TMEM98Q9Y2Y6 226 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 TAF4O00268 1085 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 DNAJA2O60884 412 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 THAP5Q7Z6K1 395 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 NDC1Q9BTX1 674 aa16.95■□□□□ 0.3
SHANK1-201ENST00000293441 PIGRP01833 764 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 ARHGDIBP52566 201 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 ZNF311Q5JNZ3 666 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 OSTM1Q86WC4 334 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 OR5T3Q8NGG3 340 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 KCTD13Q8WZ19 329 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 RGMAQ96B86 450 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 TAC3Q9UHF0 121 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 CDC14AQ9UNH5 594 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 HMGB3O15347 200 aaKnown RBP16.94■□□□□ 0.3
SHANK1-201ENST00000293441 TPD52L2O43399 206 aaKnown RBP16.94■□□□□ 0.3
SHANK1-201ENST00000293441 PAPSS2O95340 614 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-201ENST00000293441 PRKD1Q15139 912 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-201ENST00000293441 MLIPQ5VWP3 458 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 TCEAL6Q6IPX3 200 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 ZDHHC21Q8IVQ6 265 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 LRTOMTQ8WZ04 291 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 TBL1XR1Q9BZK7 514 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 PLAGL1Q9UM63 463 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 HAS3O00219 553 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 HLA-EP13747 358 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 GANABQ14697 944 aaKnown RBP16.94■□□□□ 0.3
SHANK1-201ENST00000293441 P4HA3Q7Z4N8 544 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 GRHL3Q8TE85 626 aa16.94■□□□□ 0.3
SHANK1-201ENST00000293441 WDR60Q8WVS4 1066 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms