RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 H0Y626 953 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 M0R3G1 203 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 MANBAO00462 879 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 TRIM16O95361 564 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ALPIP09923 528 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 BCKDHAP12694 445 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 IGFBP5P24593 272 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ATP5C1P36542 298 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 HALP42357 657 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ARF5P84085 180 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 IFITM3Q01628 133 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 IL18R1Q13478 541 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ATG9BQ674R7 924 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ANKRD46Q86W74 232 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 SERPINA9Q86WD7 417 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 CALHM3Q86XJ0 350 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 CARNMT1Q8N4J0 409 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 FBLIM1Q8WUP2 373 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 GLMNQ92990 594 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF566Q969W8 418 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 CPPED1Q9BRF8 314 aaPredicted RBP12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 INPP5KQ9BT40 448 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 PRSS21Q9Y6M0 314 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 OR6C75A6NL08 312 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 GOLGA8CPA6NN73 597 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 LOC730098B7Z3J9 87 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 RECQL5O94762 991 aaPredicted RBP12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 NADKO95544 446 aaPredicted RBP12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 CD160O95971 181 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ITGAMP11215 1152 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 CYBAP13498 195 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 RGS4P49798 205 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 GZMMP51124 257 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 VBP1P61758 197 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 RFX4Q33E94 735 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 USP39Q53GS9 565 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ZC3H12BQ5HYM0 836 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 LAIR1Q6GTX8 287 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 NCEH1Q6PIU2 408 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 CCDC81Q6ZN84 652 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 MBOAT1Q6ZNC8 495 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 TRIM46Q7Z4K8 759 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 B3GNT8Q7Z7M8 397 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 CYP4Z1Q86W10 505 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 GALNT13Q8IUC8 556 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ZDHHC21Q8IVQ6 265 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 C2orf69Q8N8R5 385 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 PIK3C3Q8NEB9 887 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 SOCS4Q8WXH5 440 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 LINC01599Q8WXQ3 324 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 ULK4Q96C45 1275 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 PYURFQ96I23 114 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 SPATA17Q96L03 361 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 PCDH12Q9NPG4 1184 aa12.94□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC38A8A6NNN8 435 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 JRKO75564 520 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC25A14O95258 325 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 CELF2O95319 508 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 PRAMEF1O95521 474 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 KLKB1P03952 638 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF7P17097 686 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 CD6P30203 668 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 EIF2B2P49770 351 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 RPS3AP61247 264 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 MTA1Q13330 715 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 GTF2H3Q13889 308 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 DGCR6Q14129 220 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 MRPL58Q14197 206 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 ACOX1Q15067 660 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 SMU1Q2TAY7 513 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 CARD16Q5EG05 197 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 TMEM236Q5W0B7 351 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 CPZQ66K79 652 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 CHCHD4Q8N4Q1 142 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 RHNO1Q9BSD3 238 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 ALOXE3Q9BYJ1 711 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 ATP13A3Q9H7F0 1226 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 SERHLQ9NQF3 203 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 ATAD3AQ9NVI7 634 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 TRIM17Q9Y577 477 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 PCDHGB1Q9Y5G3 927 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 PCDHGA10Q9Y5H3 936 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 TRIM43BA6NCK2 446 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC22A1O15245 554 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF682O95780 498 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 EOMESO95936 686 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 FKBP1BP68106 108 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 NPTX1Q15818 432 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 KCNA10Q16322 511 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 ATXN7L2Q5T6C5 722 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 SHQ1Q6PI26 577 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC24A5Q71RS6 500 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 CEP68Q76N32 757 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 S100ZQ8WXG8 99 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 ITPKCQ96DU7 683 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 VMP1Q96GC9 406 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 TNKS2Q9H2K2 1166 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms