RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 SMN1Q16637 294 aaKnown RBP15.4■□□□□ 0.06
USP43-201ENST00000285199 DUSP28Q4G0W2 176 aa15.4■□□□□ 0.06
USP43-201ENST00000285199 C11orf88Q6PI97 169 aa15.4■□□□□ 0.06
USP43-201ENST00000285199 VTCN1Q7Z7D3 282 aa15.4■□□□□ 0.06
USP43-201ENST00000285199 TMEM246Q9BRR3 403 aa15.4■□□□□ 0.06
USP43-201ENST00000285199 MFSD1Q9H3U5 465 aa15.4■□□□□ 0.06
USP43-201ENST00000285199 ANKRD33BA6NCL7 494 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 M0R129 80 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 TSPAN4O14817 238 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 GPR39O43194 453 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 CELF2O95319 508 aaKnown RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 ENGP17813 658 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 PTNP21246 168 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 SMAD3P84022 425 aaKnown RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 MBOAT1Q6ZNC8 495 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 DSG4Q86SJ6 1040 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 XAGE5Q8WWM1 108 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 SGCDQ92629 289 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 PAQR5Q9NXK6 330 aaPredicted RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 SLC1A7O00341 560 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 ACOT8O14734 319 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 ANXA4P09525 319 aaPredicted RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 INHBEP58166 350 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 C5orf22Q49AR2 442 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 TAPT1Q6NXT6 567 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 GPR142Q7Z601 462 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 SLC22A15Q8IZD6 547 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 RBFAQ8N0V3 343 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 C12orf42Q96LP6 360 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 R3HDMLQ9H3Y0 253 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 RNF6Q9Y252 685 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 ZFP37Q9Y6Q3 630 aaPredicted RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 A0A0D9SEW6 157 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 ILVBLA1L0T0 632 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 MAGEB17A8MXT2 336 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 SSNA1O43805 119 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 CKMT1AP12532 417 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 RPL17P18621 184 aaKnown RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 ITIH1P19827 911 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 CDKN1CP49918 316 aaPredicted RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 CARM1Q86X55 608 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 TBC1D15Q8TC07 691 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 ATL1Q8WXF7 558 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 ACDQ96AP0 544 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 TVP23BQ9NYZ1 205 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 PEX16Q9Y5Y5 336 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 S1PR4O95977 384 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 CHRNA1P02708 482 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 NR2F6P10588 404 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 NOS3P29474 1203 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 RCVRNP35243 200 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 BUD31P41223 144 aaPredicted RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 MLLT6P55198 1093 aaPredicted RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 SCN1BQ07699 218 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 PLEKHG6Q3KR16 790 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 MZT2BQ6NZ67 158 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 ASB18Q6ZVZ8 466 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 DEFB128Q7Z7B8 93 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 ZZZ3Q8IYH5 903 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 PKP4Q99569 1192 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 ADARB2Q9NS39 739 aaKnown RBP15.39■□□□□ 0.05
USP43-201ENST00000285199 BOLA1Q9Y3E2 137 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 SPEF1Q9Y4P9 236 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 NINQ8N4C6 2090 aa15.39■□□□□ 0.05
USP43-201ENST00000285199 KPNA3O00505 521 aaPredicted RBP15.38■□□□□ 0.05
USP43-201ENST00000285199 CD1DP15813 335 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 TACR2P21452 398 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 SHMT2P34897 504 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 AKR1D1P51857 326 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 RAB15P59190 212 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 ZNF544Q6NX49 715 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 SH2D5Q6ZV89 423 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 USP30Q70CQ3 517 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 LYSMD3Q7Z3D4 306 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 TMPRSS11BQ86T26 416 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 ANKRD13BQ86YJ7 626 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 YTHDF1Q9BYJ9 559 aaKnown RBP15.38■□□□□ 0.05
USP43-201ENST00000285199 OSBPL2Q9H1P3 480 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 ZNF224Q9NZL3 707 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 TMEM181Q9P2C4 612 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 CLCA2Q9UQC9 943 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 PARP4Q9UKK3 1724 aaKnown RBP15.38■□□□□ 0.05
USP43-201ENST00000285199 BRWD1Q9NSI6 2320 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 WARSP23381 471 aaKnown RBP15.38■□□□□ 0.05
USP43-201ENST00000285199 DNAJB13P59910 316 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 MRPS6P82932 125 aaKnown RBP15.38■□□□□ 0.05
USP43-201ENST00000285199 CXorf57Q6NSI4 855 aaKnown RBP15.38■□□□□ 0.05
USP43-201ENST00000285199 ZNF671Q8TAW3 534 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 GSTO2Q9H4Y5 243 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 THUMPD1Q9NXG2 353 aaKnown RBP15.38■□□□□ 0.05
USP43-201ENST00000285199 PADI3Q9ULW8 664 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 PHRF1Q9P1Y6 1649 aaKnown RBP15.38■□□□□ 0.05
USP43-201ENST00000285199 INSIG1O15503 277 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 TNFRSF1BP20333 461 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 KCNJ8Q15842 424 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 KLHL12Q53G59 568 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 IZUMO1Q8IYV9 350 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 SPARTQ8N0X7 666 aa15.38■□□□□ 0.05
USP43-201ENST00000285199 SH3YL1Q96HL8 342 aaPredicted RBP15.38■□□□□ 0.05
USP43-201ENST00000285199 BEX1Q9HBH7 125 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms