RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ME2P23368 584 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 GGT5P36269 586 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 UFM1P61960 85 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 FZD5Q13467 585 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 METTL2BQ6P1Q9 378 aaKnown RBP20.44■□□□□ 0.86
YBX3-202ENST00000279550 BLOC1S3Q6QNY0 202 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 FOXJ1Q92949 421 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 CCT7Q99832 543 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 SLC39A3Q9BRY0 314 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 FOXQ1Q9C009 403 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 FARSBQ9NSD9 589 aaKnown RBP20.44■□□□□ 0.86
YBX3-202ENST00000279550 CROTQ9UKG9 612 aa20.44■□□□□ 0.86
YBX3-202ENST00000279550 ASPDHA6ND91 283 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 FAM170BA6NMN3 283 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 BBIP1A8MTZ0 92 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 CHURC1-FNTBB4DL54 471 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 H3BNX3 289 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 LSM1O15116 133 aaKnown RBP20.43■□□□□ 0.86
YBX3-202ENST00000279550 SLC16A5O15375 505 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 EPB42P16452 691 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 SLC6A12P48065 614 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 PREPP48147 710 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 PRLHRP49683 370 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 TMEM115Q12893 351 aaPredicted RBP20.43■□□□□ 0.86
YBX3-202ENST00000279550 SP140Q13342 867 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 ATP6AP1LQ52LC2 224 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 TLDC1Q6P9B6 456 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 NEK10Q6ZWH5 1172 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 KBTBD6Q86V97 674 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 NUS1Q96E22 293 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 NTMT1Q9BV86 223 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 GMPR2Q9P2T1 348 aaKnown RBP20.43■□□□□ 0.86
YBX3-202ENST00000279550 TRPS1Q9UHF7 1281 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 LRRC42Q9Y546 428 aa20.43■□□□□ 0.86
YBX3-202ENST00000279550 MANBAO00462 879 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 ACOT8O14734 319 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 PLRG1O43660 514 aaKnown RBP20.42■□□□□ 0.86
YBX3-202ENST00000279550 LZTS3O60299 673 aaPredicted RBP20.42■□□□□ 0.86
YBX3-202ENST00000279550 PCDH8O95206 1070 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 ACADMP11310 421 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 IL12AP29459 219 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 PDCD4Q53EL6 469 aaKnown RBP20.42■□□□□ 0.86
YBX3-202ENST00000279550 TMEM220Q6QAJ8 160 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 USP30Q70CQ3 517 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 SYT13Q7L8C5 426 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 FNDC5Q8NAU1 212 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 FLCNQ8NFG4 579 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 ASZ1Q8WWH4 475 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 NELL2Q99435 816 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 TRIM54Q9BYV2 358 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 SLC32A1Q9H598 525 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 KLQ9UEF7 1012 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 FZD4Q9ULV1 537 aa20.42■□□□□ 0.86
YBX3-202ENST00000279550 NVLO15381 856 aaKnown RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 MAP3K7O43318 606 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 EBLN1P0CF75 366 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 GABRG2P18507 467 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 TCN1P20061 433 aaPredicted RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 PBLDP30039 288 aaPredicted RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 DGKEP52429 567 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 ATXN3P54252 364 aaPredicted RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 ADPRHP54922 357 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 IRX1P78414 480 aaPredicted RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 ABRQ12979 859 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 FLOT2Q14254 428 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 GAS6Q14393 721 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 NR6A1Q15406 480 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 TAF11Q15544 211 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 SGO1Q5FBB7 561 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 KIAA1324Q6UXG2 1013 aaKnown RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 ZNF765Q7L2R6 523 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 LRRC70Q7Z2Q7 622 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 NLRP8Q86W28 1048 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 KBTBD2Q8IY47 623 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 OR14C36Q8NHC7 312 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 CCM2Q9BSQ5 444 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 IL1RL2Q9HB29 575 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 POLMQ9NP87 494 aaPredicted RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 MUTYHQ9UIF7 546 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 NDUFAF1Q9Y375 327 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 SLC5A10A0PJK1 596 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 ARHGEF33A8MVX0 844 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 FXYD1O00168 92 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 ATG13O75143 517 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 RPSAP08865 295 aaKnown RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 CYP2A7P20853 494 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 PTCHD3Q3KNS1 767 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 ZNF658BQ4V348 819 aaPredicted RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 SYTL3Q4VX76 610 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 NEK5Q6P3R8 708 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 ADGRG6Q86SQ4 1221 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 TCAIMQ8N3R3 496 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 VPS33AQ96AX1 596 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 PYCR2Q96C36 320 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 SPDL1Q96EA4 605 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 GPATCH1Q9BRR8 931 aaKnown RBP20.41■□□□□ 0.86
YBX3-202ENST00000279550 TMEM181Q9P2C4 612 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 CD300AQ9UGN4 299 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 MCM8Q9UJA3 840 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms