RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 DENND1AQ8TEH3 1009 aa12.37□□□□□ -0.43
SS18-202ENST00000269138 RAD51AP1Q96B01 352 aa12.37□□□□□ -0.43
SS18-202ENST00000269138 TSPAN17Q96FV3 270 aa12.37□□□□□ -0.43
SS18-202ENST00000269138 TMEM74Q96NL1 305 aa12.37□□□□□ -0.43
SS18-202ENST00000269138 DPYSL5Q9BPU6 564 aa12.37□□□□□ -0.43
SS18-202ENST00000269138 DHRS4Q9BTZ2 278 aa12.37□□□□□ -0.43
SS18-202ENST00000269138 POPDC3Q9HBV1 291 aa12.37□□□□□ -0.43
SS18-202ENST00000269138 EPHA6Q9UF33 1036 aa12.37□□□□□ -0.43
SS18-202ENST00000269138 PDE10AQ9Y233 779 aa12.37□□□□□ -0.43
SS18-202ENST00000269138 KNTC1P50748 2209 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 GSAPA4D1B5 854 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 NPEPPSL1A6NEC2 478 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 MYO1CO00159 1063 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 RASGRF2O14827 1237 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 SYF2O95926 243 aaKnown RBP12.36□□□□□ -0.43
SS18-202ENST00000269138 CHRM5P08912 532 aaPredicted RBP12.36□□□□□ -0.43
SS18-202ENST00000269138 CCDC166P0CW27 439 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 PEBP1P30086 187 aaKnown RBP12.36□□□□□ -0.43
SS18-202ENST00000269138 LSSP48449 732 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 RAB28P51157 221 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 KPNA2P52292 529 aaKnown RBP12.36□□□□□ -0.43
SS18-202ENST00000269138 FASTKQ14296 549 aaKnown RBP12.36□□□□□ -0.43
SS18-202ENST00000269138 PHKG1Q16816 387 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 LRRC8EQ6NSJ5 796 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 ARMC6Q6NXE6 501 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 MBOAT1Q6ZNC8 495 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 ARHGAP22Q7Z5H3 698 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 TAX1BP1Q86VP1 789 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 NKAPQ8N5F7 415 aaKnown RBP12.36□□□□□ -0.43
SS18-202ENST00000269138 OR9A1PQ8NGU1 263 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 ZDHHC12Q96GR4 267 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 PDLIM5Q96HC4 596 aaKnown RBP12.36□□□□□ -0.43
SS18-202ENST00000269138 MAP3K3Q99759 626 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 SLC12A9Q9BXP2 914 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 RAB33BQ9H082 229 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 SYTL2Q9HCH5 934 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 ACTR10Q9NZ32 417 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 IKBKGQ9Y6K9 419 aa12.36□□□□□ -0.43
SS18-202ENST00000269138 ZBTB14O43829 449 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 ALDOAP04075 364 aaKnown RBP12.35□□□□□ -0.43
SS18-202ENST00000269138 C8GP07360 202 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 SLC35E2BP0CK96 405 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 HGFP14210 728 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 MAP4P27816 1152 aaKnown RBP12.35□□□□□ -0.43
SS18-202ENST00000269138 PRDX3P30048 256 aaKnown RBP12.35□□□□□ -0.43
SS18-202ENST00000269138 SEPHS1P49903 392 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 SERPINB9P50453 376 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 CSRP3P50461 194 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 DLG1Q12959 904 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 PRKAA1Q13131 559 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 CACHD1Q5VU97 1274 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 EMBQ6PCB8 327 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 RAPH1Q70E73 1250 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 TRIM73Q86UV7 250 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 FAM20CQ8IXL6 584 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 FBXO15Q8NCQ5 510 aaPredicted RBP12.35□□□□□ -0.43
SS18-202ENST00000269138 OR2L8Q8NGY9 312 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 FLVCR1-AS1Q8TAF5 88 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 MAGEC3Q8TD91 643 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 CAVIN3Q969G5 261 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 OR2A14Q96R47 310 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 STRADBQ9C0K7 418 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 TWSG1Q9GZX9 223 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 PARVBQ9HBI1 364 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 SNX15Q9NRS6 342 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 OR6C2Q9NZP2 312 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 ZNF180Q9UJW8 692 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 POMT2Q9UKY4 750 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 MSRB2Q9Y3D2 182 aa12.35□□□□□ -0.43
SS18-202ENST00000269138 IGHV5-51A0A0C4DH38 117 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 PIPSLA2A3N6 862 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 TRABD2BA6NFA1 517 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 C2orf74A8MZ97 194 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 TRIM49D1C9J1S8 452 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 TMX2-CTNND1H3BSU7 103 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 SLC16A5O15375 505 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 KDM1AO60341 852 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 RASSF9O75901 435 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 SLC16A8O95907 504 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 MPOP05164 745 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 C2P06681 752 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 CCL4P13236 92 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 UGT2B7P16662 529 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 CRABP2P29373 138 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 SHC2P98077 582 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 IRF9Q00978 393 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 CSHL1Q14406 222 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 C3orf38Q5JPI3 329 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 FOXR1Q6PIV2 292 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 ADGRD1Q6QNK2 874 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 SBSNQ6UWP8 590 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 RAB11FIP2Q7L804 512 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 PPFIBP2Q8ND30 876 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 OR2W6PQ8NHA6 318 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 MCOLN3Q8TDD5 553 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 ZNF480Q8WV37 535 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 LIN37Q96GY3 246 aaPredicted RBP12.34□□□□□ -0.43
SS18-202ENST00000269138 UBXN10Q96LJ8 280 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms