RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 RP1L1Q8IWN7 2480 aaPredicted RBP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 PCDH7O60245 1069 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 LGALS3BPQ08380 585 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 FRG2Q64ET8 278 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 C3orf58Q8NDZ4 430 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 SEC14L1Q92503 715 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 DNASE1L2Q92874 299 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 KIAA1191Q96A73 305 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 FRG2BQ96QU4 278 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 ZIC5Q96T25 663 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 LRRC3Q9BY71 257 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 BTBD1Q9H0C5 482 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 MRM3Q9HC36 420 aaKnown RBP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 RASSF1Q9NS23 344 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 SLC7A8Q9UHI5 535 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 MGRN1O60291 552 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 HNRNPA1P09651 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 NCK1P16333 377 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 RPL10P27635 214 aaKnown RBP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 GDF5P43026 501 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 TAF13Q15543 124 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 RBM44Q6ZP01 1051 aaKnown RBP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 FAM92BQ6ZTR7 304 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 KCNJ9Q92806 393 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 SCAMP4Q969E2 229 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 HERPUD2Q9BSE4 406 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 CCM2Q9BSQ5 444 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 COL18A1P39060 1754 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 MYH7P12883 1935 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 TMEM233B4DJY2 109 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 MAFKO60675 156 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 DBTP11182 482 aaKnown RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 PEX2P28328 305 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 COX10Q12887 443 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 DLG1Q12959 904 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 LRRC32Q14392 662 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SLBPQ14493 270 aaKnown RBP eCLIP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 HERC3Q15034 1050 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 ZNF730Q6ZMV8 503 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 FAM220AQ7Z4H9 259 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 THAP5Q7Z6K1 395 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 ENKURQ8TC29 256 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 PIH1D2Q8WWB5 315 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 TFGQ92734 400 aaPredicted RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SLC22A18Q96BI1 424 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 DERL2Q9GZP9 239 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 ADAM7Q9H2U9 754 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 ZDHHC2Q9UIJ5 367 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 PHF24Q9UPV7 400 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SOCS5O75159 536 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SEC24AO95486 1093 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 TRIM71Q2Q1W2 868 aaKnown RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 NPWQ8N729 165 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 C2CD4AQ8NCU7 369 aaPredicted RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 PIK3C3Q8NEB9 887 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 DZANK1Q9NVP4 752 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 ZNF282Q9UDV7 671 aaPredicted RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 RSL24D1Q9UHA3 163 aaKnown RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 E7ESA3 106 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SAP18O00422 153 aaKnown RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 CXCR6O00574 342 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 TGM5O43548 720 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 LEFTY1O75610 366 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 PGLSO95336 258 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 CBSLP0DN79 551 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 CBSP35520 551 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SLC38A4Q969I6 547 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SAMD11Q96NU1 681 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SGIP1Q9BQI5 828 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 RETREG1Q9H6L5 497 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 TMEM27Q9HBJ8 222 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 MRPS30Q9NP92 439 aaKnown RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 RAB26Q9ULW5 256 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 FAM86C2PA6NEL3 165 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 FADS2P1A8MWK0 482 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 ACTR3P61158 418 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 ACSBG2Q5FVE4 666 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 NEK5Q6P3R8 708 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 LRRC70Q7Z2Q7 622 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 NXPE1Q8N323 547 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SCAIQ8N9R8 606 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 OR52J3Q8NH60 311 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 WDR60Q8WVS4 1066 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 LRTOMTQ8WZ04 291 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 MRGPRX2Q96LB1 330 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SPRTNQ9H040 489 aaPredicted RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 NSUN3Q9H649 340 aaKnown RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 CALML5Q9NZT1 146 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 CRNNQ9UBG3 495 aaPredicted RBP15.09■□□□□ 0.01
TIMP3-201ENST00000266085 GJD2Q9UKL4 321 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 PPM1HQ9ULR3 514 aa15.09■□□□□ 0.01
TIMP3-201ENST00000266085 SAGP10523 405 aaPredicted RBP15.08■□□□□ 0
TIMP3-201ENST00000266085 NDUFS1P28331 727 aa15.08■□□□□ 0
TIMP3-201ENST00000266085 PRAMEF14Q5SWL7 426 aa15.08■□□□□ 0
TIMP3-201ENST00000266085 PRAMEF13Q5VWM6 474 aa15.08■□□□□ 0
TIMP3-201ENST00000266085 FAAH2Q6GMR7 532 aa15.08■□□□□ 0
TIMP3-201ENST00000266085 ZNF783Q6ZMS7 281 aa15.08■□□□□ 0
TIMP3-201ENST00000266085 FAM46DQ8NEK8 389 aa15.08■□□□□ 0
TIMP3-201ENST00000266085 ZNF563Q8TA94 476 aa15.08■□□□□ 0
TIMP3-201ENST00000266085 FAM81AQ8TBF8 368 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms