RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 GLYATL1Q969I3 302 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 TIFAQ96CG3 184 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 SLC29A3Q9BZD2 475 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 RAD18Q9NS91 495 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 NFKBIL1Q9UBC1 381 aaPredicted RBP16.46■□□□□ 0.23
CHKA-201ENST00000265689 SPINT1O43278 529 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 PRAMEF4O60810 478 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 JAK1P23458 1154 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 VARSP26640 1264 aaKnown RBP16.46■□□□□ 0.22
CHKA-201ENST00000265689 SP140Q13342 867 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 PRAMEF9Q5VWM5 478 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 RNF165Q6ZSG1 346 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 TCAIMQ8N3R3 496 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 PPM1MQ96MI6 270 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 ASB16Q96NS5 453 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 KCTD14Q9BQ13 255 aaPredicted RBP16.46■□□□□ 0.22
CHKA-201ENST00000265689 ACPTQ9BZG2 426 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 ACTR3BQ9P1U1 418 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 CIDEBQ9UHD4 219 aa16.46■□□□□ 0.22
CHKA-201ENST00000265689 WNT9AO14904 365 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 SLC16A5O15375 505 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 SLCO2B1O94956 709 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 KRT6AP02538 564 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 KRT6BP04259 564 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 NCK1P16333 377 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 PREPP48147 710 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 KRT6CP48668 564 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 HNMTP50135 292 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 KIAA0040Q15053 153 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 MTX3Q5HYI7 312 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 LDLRAP1Q5SW96 308 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 OR52E8Q6IFG1 317 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 LCN8Q6JVE9 175 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 PDE12Q6L8Q7 609 aaKnown RBP16.45■□□□□ 0.22
CHKA-201ENST00000265689 SUSD1Q6UWL2 747 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 DPP10Q8N608 796 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 HCAR2Q8TDS4 363 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 EME1Q96AY2 570 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 ARRDC3Q96B67 414 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 MSRAQ9UJ68 235 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 AURKCQ9UQB9 309 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 F5P12259 2224 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 KCNE1BA0A087WTH5 132 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 ENO4A6NNW6 628 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 MAP3K13O43283 966 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 HYAL1Q12794 435 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 TMEM115Q12893 351 aaPredicted RBP16.45■□□□□ 0.22
CHKA-201ENST00000265689 KCNC3Q14003 757 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 SELPLGQ14242 412 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 PDK3Q15120 406 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 C9orf64Q5T6V5 341 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 TTC23LQ6PF05 361 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 RALGPS2Q86X27 583 aaPredicted RBP16.45■□□□□ 0.22
CHKA-201ENST00000265689 HID1Q8IV36 788 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 KRTCAP2Q8N6L1 136 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 CLHC1Q8NHS4 586 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 SELENOMQ8WWX9 145 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 PPWD1Q96BP3 646 aaKnown RBP16.45■□□□□ 0.22
CHKA-201ENST00000265689 UHRF1Q96T88 793 aaPredicted RBP16.45■□□□□ 0.22
CHKA-201ENST00000265689 TRIM15Q9C019 465 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 DEC1Q9P2X7 70 aa16.45■□□□□ 0.22
CHKA-201ENST00000265689 DMDP11532 3685 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 DYTNA2CJ06 578 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 AQP12BA6NM10 295 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 HEPACAM2A8MVW5 462 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 ARNTLO00327 626 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 NFATC1O95644 943 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 ZNF26P17031 533 aaPredicted RBP16.44■□□□□ 0.22
CHKA-201ENST00000265689 PBLDP30039 288 aaPredicted RBP16.44■□□□□ 0.22
CHKA-201ENST00000265689 MAD2L1Q13257 205 aaPredicted RBP16.44■□□□□ 0.22
CHKA-201ENST00000265689 NEK10Q6ZWH5 1172 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 AQP12AQ8IXF9 295 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 PIP4K2CQ8TBX8 421 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 SMARCD2Q92925 531 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 VPS35Q96QK1 796 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 RPP25Q9BUL9 199 aaKnown RBP16.44■□□□□ 0.22
CHKA-201ENST00000265689 EFHD1Q9BUP0 239 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 COQ10BQ9H8M1 238 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 CCM2LQ9NUG4 571 aaPredicted RBP16.44■□□□□ 0.22
CHKA-201ENST00000265689 DNAJC11Q9NVH1 559 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 C1orf109Q9NX04 203 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 NUP210Q8TEM1 1887 aaPredicted RBP16.44■□□□□ 0.22
CHKA-201ENST00000265689 DHRS12A0PJE2 317 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 ARHGEF33A8MVX0 844 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 PRNPP04156 253 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 OXTRP30559 389 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 AP1S2P56377 157 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 EEFSECP57772 596 aaKnown RBP16.44■□□□□ 0.22
CHKA-201ENST00000265689 PFN3P60673 137 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 GRM2Q14416 872 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 NRF1Q16656 503 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 SMU1Q2TAY7 513 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 SYTL3Q4VX76 610 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.44■□□□□ 0.22
CHKA-201ENST00000265689 CACHD1Q5VU97 1274 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 SYCE2Q6PIF2 218 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 TMEM220Q6QAJ8 160 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 TRIM74Q86UV6 250 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 RASGRP3Q8IV61 690 aa16.44■□□□□ 0.22
CHKA-201ENST00000265689 PHC3Q8NDX5 983 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms