RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ACTL7BQ9Y614 415 aa13.86□□□□□ -0.19
SSBP1-201ENST00000265304 DCHS1Q96JQ0 3298 aa13.86□□□□□ -0.19
SSBP1-201ENST00000265304 TLDC2A0PJX2 215 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 RHPN2P1A8MT19 583 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 CDC7O00311 574 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 KDM1AO60341 852 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 MTHFD2P13995 350 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 CD1CP29017 333 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 PKLRP30613 574 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 SHMT2P34897 504 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 GGT5P36269 586 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 RAB28P51157 221 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 IRF9Q00978 393 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 CSHL1Q14406 222 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 TSNQ15631 228 aaKnown RBP13.85□□□□□ -0.19
SSBP1-201ENST00000265304 PHKG1Q16816 387 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 ZXDCQ2QGD7 858 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-201ENST00000265304 KRT71Q3SY84 523 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 CCSMST1Q4G0I0 132 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 CEP85LQ5SZL2 805 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 TTC23LQ6PF05 361 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 WDR74Q6RFH5 385 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-201ENST00000265304 UBE2R2Q712K3 238 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-201ENST00000265304 EFL1Q7Z2Z2 1120 aaKnown RBP13.85□□□□□ -0.19
SSBP1-201ENST00000265304 TRIM48Q8IWZ4 208 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 BANPQ8N9N5 519 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 OR2L8Q8NGY9 312 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 KCTD4Q8WVF5 259 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 CCDC74AQ96AQ1 378 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 CCDC138Q96M89 665 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 SH3GL2Q99962 352 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 RAB11FIP5Q9BXF6 653 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 SSU72Q9NP77 194 aaKnown RBP13.85□□□□□ -0.19
SSBP1-201ENST00000265304 ICKQ9UPZ9 632 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 RUVBL2Q9Y230 463 aaKnown RBP13.85□□□□□ -0.19
SSBP1-201ENST00000265304 SPTBP11277 2137 aa13.85□□□□□ -0.19
SSBP1-201ENST00000265304 A0A1W2PQM1 296 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 BTN3A1O00481 513 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 KERAO60938 352 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 FKBP9O95302 570 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 C9P02748 559 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 RBP1P09455 135 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 SBK3P0C264 359 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 PYGBP11216 843 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 MYF5P13349 255 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 KRT15P19012 456 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 CYP2A7P20853 494 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 GMPRP36959 345 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 HNMTP50135 292 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 DAB2P98082 770 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 CFHR1Q03591 330 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 TGFBIQ15582 683 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 OR4D1Q15615 310 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 TECRLQ5HYJ1 363 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 CDCP2Q5VXM1 449 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 KLHL35Q6PF15 583 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 ALYREFQ86V81 257 aaKnown RBP13.84□□□□□ -0.19
SSBP1-201ENST00000265304 ADGRF3Q8IZF5 1079 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 CARFQ8N187 725 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 LINC01555Q8NAE3 123 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 FLVCR1-AS1Q8TAF5 88 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 IFI44Q8TCB0 444 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 LCN9Q8WX39 176 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 ALKBH8Q96BT7 664 aaKnown RBP13.84□□□□□ -0.19
SSBP1-201ENST00000265304 FBXL8Q96CD0 374 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 TLCD1Q96CP7 247 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 PKP4Q99569 1192 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 SLC38A3Q99624 504 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 MRPL57Q9BQC6 102 aaKnown RBP13.84□□□□□ -0.19
SSBP1-201ENST00000265304 TRIM54Q9BYV2 358 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 TMBIM4Q9HC24 238 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 ZNF446Q9NWS9 450 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 CDV3Q9UKY7 258 aaKnown RBP13.84□□□□□ -0.19
SSBP1-201ENST00000265304 KLK4Q9Y5K2 254 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 ENTPD2Q9Y5L3 495 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 SPEGQ15772 3267 aa13.84□□□□□ -0.19
SSBP1-201ENST00000265304 CPED1A4D0V7 1026 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 E7ENX8 843 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 MATN2O00339 956 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 RGS16O15492 202 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-201ENST00000265304 TYROBPO43914 113 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 OPA1O60313 960 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 UBXN7O94888 489 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 SLC16A8O95907 504 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 KRT4P19013 534 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 TFEBP19484 476 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 CCT5P48643 541 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 SLC18A1P54219 525 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 OR1D5P58170 312 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 TAP2Q03519 686 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 PRKG2Q13237 762 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 KRT33BQ14525 404 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 RSPO4Q2I0M5 234 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-201ENST00000265304 ANKS6Q68DC2 871 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 METTL2BQ6P1Q9 378 aaKnown RBP13.83□□□□□ -0.2
SSBP1-201ENST00000265304 SLCO6A1Q86UG4 719 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 EXOC3L1Q86VI1 746 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 AMIGO1Q86WK6 493 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 SPATA6LQ8N4H0 392 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms