RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MED31Q9Y3C7 131 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 MRPS23Q9Y3D9 190 aaKnown RBP11.84□□□□□ -0.51
SMG6-201ENST00000263073 C3P01024 1663 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TREHO43280 583 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 GBAP04062 536 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 CRYBB1P53674 252 aaPredicted RBP11.84□□□□□ -0.51
SMG6-201ENST00000263073 ZNF267Q14586 743 aaPredicted RBP11.84□□□□□ -0.51
SMG6-201ENST00000263073 PPP1R3AQ16821 1122 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 SYPL2Q5VXT5 272 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 OR4F3Q6IEY1 312 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 GALNT12Q8IXK2 581 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 B3GNT4Q9C0J1 378 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 PCDHB1Q9Y5F3 818 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 DAPL1A0PJW8 107 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 OR2AT4A6NND4 320 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TSPAN1O60635 241 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 CDH1P12830 882 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 NFKB2Q00653 900 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 RHDQ02161 417 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 SCARB2Q14108 478 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 LARS2Q15031 903 aaKnown RBP11.84□□□□□ -0.51
SMG6-201ENST00000263073 PDCD4Q53EL6 469 aaKnown RBP11.84□□□□□ -0.51
SMG6-201ENST00000263073 IGDCC3Q8IVU1 814 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 C1orf109Q9NX04 203 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TRAV6A0A075B6T7 132 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 C2orf92A0A1B0GVN3 265 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 MEN1O00255 615 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 CDRT1O95170 752 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 ENGP17813 658 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 L1CAMP32004 1257 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 SLC3A1Q07837 685 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 PTP4A2Q12974 167 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 SCGB2B2Q4G0G5 96 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 PRSS58Q8IYP2 241 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 SLC37A3Q8NCC5 494 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 NAXEQ8NCW5 288 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TTYH2Q9BSA4 534 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 TIGARQ9NQ88 270 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 MAFFQ9ULX9 164 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 PLCL2Q9UPR0 1127 aa11.84□□□□□ -0.51
SMG6-201ENST00000263073 URADA6NGE7 173 aa11.83□□□□□ -0.51
SMG6-201ENST00000263073 PDPK1O15530 556 aa11.83□□□□□ -0.51
SMG6-201ENST00000263073 RPP14O95059 124 aaKnown RBP11.83□□□□□ -0.51
SMG6-201ENST00000263073 RNF144AP50876 292 aaPredicted RBP11.83□□□□□ -0.51
SMG6-201ENST00000263073 SOWAHAQ2M3V2 549 aa11.83□□□□□ -0.51
SMG6-201ENST00000263073 PARP15Q460N3 678 aa11.83□□□□□ -0.51
SMG6-201ENST00000263073 MARCH9Q86YJ5 346 aa11.83□□□□□ -0.51
SMG6-201ENST00000263073 KLK6Q92876 244 aa11.83□□□□□ -0.51
SMG6-201ENST00000263073 C14orf119Q9NWQ9 140 aa11.83□□□□□ -0.51
SMG6-201ENST00000263073 MAN2B2Q9Y2E5 1009 aa11.83□□□□□ -0.51
SMG6-201ENST00000263073 LRRC72A6NJI9 287 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 A8MT66 165 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 C1QTNF3-AMACRE9PGA6 284 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 INSIG1O15503 277 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 GMPRP36959 345 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 MAPK8P45983 427 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 XKP51811 444 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 TLR1Q15399 786 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 RBM20Q5T481 1227 aaKnown RBP11.83□□□□□ -0.52
SMG6-201ENST00000263073 PTF1AQ7RTS3 328 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 LRRC3Q9BY71 257 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 QSOX1O00391 747 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 TBX18O95935 607 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 TGFB1P01137 390 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 RPL17P18621 184 aaKnown RBP11.83□□□□□ -0.52
SMG6-201ENST00000263073 GDF5P43026 501 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 MAGEA12P43365 314 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 ALG11Q2TAA5 492 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 ZNF558Q96NG5 402 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 SLC25A51Q9H1U9 297 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 TAS2R7Q9NYW3 318 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 FZD4Q9ULV1 537 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 FAM234BA2RU67 622 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 PAPSS2O95340 614 aaPredicted RBP11.83□□□□□ -0.52
SMG6-201ENST00000263073 SCGB1D2O95969 90 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 ALPIP09923 528 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 ASMTP46597 345 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 CLK3P49761 638 aaKnown RBP11.83□□□□□ -0.52
SMG6-201ENST00000263073 HERVK_113P63132 956 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 VLDLRP98155 873 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 DSC3Q14574 896 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 SLC8B1Q6J4K2 584 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 PSRC1Q6PGN9 363 aaPredicted RBP11.83□□□□□ -0.52
SMG6-201ENST00000263073 EGFL6Q8IUX8 553 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 DUSP26Q9BV47 211 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 ERVK-6Q9BXR3 956 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 CST11Q9H112 138 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 NECTIN3Q9NQS3 549 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 KIAA1522Q9P206 1035 aaPredicted RBP11.83□□□□□ -0.52
SMG6-201ENST00000263073 SLC22A1O15245 554 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 ECI2O75521 394 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 SKP1P63208 163 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 SLC10A7Q0GE19 358 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 IKBKEQ14164 716 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 BTBD16Q32M84 506 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 ADNP2Q6IQ32 1131 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 LGI4Q8N135 537 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 ITPAQ9BY32 194 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 POLR2J3Q9H1A7 115 aaKnown RBP11.83□□□□□ -0.52
SMG6-201ENST00000263073 FBRSL1Q9HCM7 1045 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms