RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 CIPCQ9C0C6 399 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 KAT8Q9H7Z6 458 aaKnown RBP17.08■□□□□ 0.32
TRAM1-201ENST00000262213 SCN3BQ9NY72 215 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 SLCO3A1Q9UIG8 710 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 AGO1Q9UL18 857 aaKnown RBP17.08■□□□□ 0.32
TRAM1-201ENST00000262213 RIMKLBQ9ULI2 386 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 VPS4AQ9UN37 437 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 TPRKBQ9Y3C4 175 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 NAALAD2Q9Y3Q0 740 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 CCL27Q9Y4X3 112 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 SCAMP3O14828 347 aaKnown RBP17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PER2O15055 1255 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 TAPBPO15533 448 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 ULK1O75385 1050 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 RYKP34925 604 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 MAPKAPK2P49137 400 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 ST13P50502 369 aaKnown RBP17.07■□□□□ 0.32
TRAM1-201ENST00000262213 NKX2-5P52952 324 aaPredicted RBP17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PHC1P78364 1004 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 AHSA2Q719I0 299 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 DYNC2LI1Q8TCX1 351 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 ULK4Q96C45 1275 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 YIPF6Q96EC8 236 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PYURFQ96I23 114 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 TSSK3Q96PN8 268 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PTPN18Q99952 460 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 BOCQ9BWV1 1114 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 LRTM1Q9HBL6 345 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 C1orf109Q9NX04 203 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 SCHIP1Q9P0W5 487 aaPredicted RBP17.07■□□□□ 0.32
TRAM1-201ENST00000262213 VPS9D1Q9Y2B5 631 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 TNPO3Q9Y5L0 923 aaKnown RBP17.07■□□□□ 0.32
TRAM1-201ENST00000262213 AREL1O15033 823 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 RAD51BO15315 384 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PRAMEF12O95522 483 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 ALOX5P09917 674 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PABPC1P11940 636 aaKnown RBP17.07■□□□□ 0.32
TRAM1-201ENST00000262213 GNPDA1P46926 289 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 DAPP51397 102 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PCBP2Q15366 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRAM1-201ENST00000262213 CPSF6Q16630 551 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PHKG1Q16816 387 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 FAM110CQ1W6H9 321 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 VARS2Q5ST30 1063 aaKnown RBP17.07■□□□□ 0.32
TRAM1-201ENST00000262213 AGAP7PQ5VUJ5 663 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 FAM151BQ6UXP7 276 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 C16orf59Q7L2K0 433 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 LKAAEAR1Q8TD35 194 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PSKH2Q96QS6 385 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 MAGEE1Q9HCI5 957 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 PCDHB8Q9UN66 801 aa17.07■□□□□ 0.32
TRAM1-201ENST00000262213 SLC16A6O15403 523 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 TYMPP19971 482 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 SERPINB1P30740 379 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 CDKN2CP42773 168 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 GBX1Q14549 363 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 ACOX1Q15067 660 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 COLEC12Q5KU26 742 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 CPZQ66K79 652 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 PAF1Q8N7H5 531 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 PYCR2Q96C36 320 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 SH3GL1Q99961 368 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 NECTIN3Q9NQS3 549 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 OPTCQ9UBM4 332 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRAM1-201ENST00000262213 A0A0U1RQF3 1178 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 ANKRD66B4E2M5 251 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 LOC730098B7Z3J9 87 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 BMP1P13497 986 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 CD36P16671 472 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 CD40LGP29965 261 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 ADAMTSL2Q86TH1 951 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 SCAIQ8N9R8 606 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 SETD9Q8NE22 299 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 MCFD2Q8NI22 146 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 LGALS12Q96DT0 336 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 ZHX1-C8orf76Q96EF9 292 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 ZNF300Q96RE9 604 aaPredicted RBP17.06■□□□□ 0.32
TRAM1-201ENST00000262213 PARK7Q99497 189 aaKnown RBP17.06■□□□□ 0.32
TRAM1-201ENST00000262213 SIAEQ9HAT2 523 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 TLR8Q9NR97 1041 aaKnown RBP17.06■□□□□ 0.32
TRAM1-201ENST00000262213 PDP1Q9P0J1 537 aaPredicted RBP17.06■□□□□ 0.32
TRAM1-201ENST00000262213 KIF17Q9P2E2 1029 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 PCDHB5Q9Y5E4 795 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 BRCA2P51587 3418 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 TTC34A8MYJ7 566 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 RGS10O43665 173 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 IL6P05231 212 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 CA5AP35218 305 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 PCYT1AP49585 367 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 SLC35A2P78381 396 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 SLC14A1Q13336 389 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 VTCN1Q7Z7D3 282 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 ZNF598Q86UK7 904 aaKnown RBP17.06■□□□□ 0.32
TRAM1-201ENST00000262213 CHPFQ8IZ52 775 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 PSD2Q9BQI7 771 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 C6orf62Q9GZU0 229 aaPredicted RBP17.06■□□□□ 0.32
TRAM1-201ENST00000262213 NACA2Q9H009 215 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 DSN1Q9H410 356 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 ZBTB20Q9HC78 741 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms