RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ELP6Q0PNE2 266 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 USP10Q14694 798 aaKnown RBP13.01□□□□□ -0.33
SGCA-201ENST00000262018 NFATC4Q14934 902 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 ZKSCAN8Q15776 578 aaPredicted RBP13.01□□□□□ -0.33
SGCA-201ENST00000262018 ANKS6Q68DC2 871 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 MRNIPQ6NTE8 343 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 CNSTQ6PJW8 725 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 AFTPHQ6ULP2 937 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 PIGWQ7Z7B1 504 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 TTC7BQ86TV6 843 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 LCA5Q86VQ0 697 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 FAM129CQ86XR2 697 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 ARMC2Q8NEN0 867 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 OR4K2Q8NGD2 314 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 OR4L1Q8NH43 312 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 PRR7Q8TB68 274 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 CXorf40AQ8TE69 158 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 PDXPQ96GD0 296 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 SUDS3Q9H7L9 328 aaPredicted RBP13.01□□□□□ -0.33
SGCA-201ENST00000262018 CAB39LQ9H9S4 337 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 CATSPERZQ9NTU4 200 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 OCIAD1Q9NX40 245 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.01□□□□□ -0.33
SGCA-201ENST00000262018 MARCH4Q9P2E8 410 aaPredicted RBP13.01□□□□□ -0.33
SGCA-201ENST00000262018 SLC39A10Q9ULF5 831 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 ZNF711Q9Y462 761 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 ZNF106Q9H2Y7 1883 aaKnown RBP13.01□□□□□ -0.33
SGCA-201ENST00000262018 HIVEP3Q5T1R4 2406 aa13□□□□□ -0.33
SGCA-201ENST00000262018 A0A0J9YYE9 177 aa13□□□□□ -0.33
SGCA-201ENST00000262018 OR51F1A6NGY5 319 aa13□□□□□ -0.33
SGCA-201ENST00000262018 KLF11O14901 512 aa13□□□□□ -0.33
SGCA-201ENST00000262018 AREL1O15033 823 aa13□□□□□ -0.33
SGCA-201ENST00000262018 PLIN3O60664 434 aa13□□□□□ -0.33
SGCA-201ENST00000262018 TRBC1P01850 177 aa13□□□□□ -0.33
SGCA-201ENST00000262018 COL6A2P12110 1019 aa13□□□□□ -0.33
SGCA-201ENST00000262018 TIMP2P16035 220 aa13□□□□□ -0.33
SGCA-201ENST00000262018 MPSTP25325 297 aa13□□□□□ -0.33
SGCA-201ENST00000262018 CRABP2P29373 138 aa13□□□□□ -0.33
SGCA-201ENST00000262018 RAB10P61026 200 aa13□□□□□ -0.33
SGCA-201ENST00000262018 POU4F1Q01851 419 aa13□□□□□ -0.33
SGCA-201ENST00000262018 MRPL49Q13405 166 aaKnown RBP13□□□□□ -0.33
SGCA-201ENST00000262018 TRA2AQ13595 282 aaKnown RBP eCLIP13□□□□□ -0.33
SGCA-201ENST00000262018 TYSND1Q2T9J0 566 aa13□□□□□ -0.33
SGCA-201ENST00000262018 ZNF789Q5FWF6 425 aa13□□□□□ -0.33
SGCA-201ENST00000262018 ERAP2Q6P179 960 aa13□□□□□ -0.33
SGCA-201ENST00000262018 ZSWIM9Q86XI8 627 aa13□□□□□ -0.33
SGCA-201ENST00000262018 TRIM42Q8IWZ5 723 aa13□□□□□ -0.33
SGCA-201ENST00000262018 OTUD6BQ8N6M0 293 aa13□□□□□ -0.33
SGCA-201ENST00000262018 SEC16BQ96JE7 1060 aa13□□□□□ -0.33
SGCA-201ENST00000262018 WRAP53Q9BUR4 548 aaKnown RBP13□□□□□ -0.33
SGCA-201ENST00000262018 APOOQ9BUR5 198 aa13□□□□□ -0.33
SGCA-201ENST00000262018 ZMYND15Q9H091 742 aa13□□□□□ -0.33
SGCA-201ENST00000262018 MANSC1Q9H8J5 431 aa13□□□□□ -0.33
SGCA-201ENST00000262018 FGFR1OP2Q9NVK5 253 aa13□□□□□ -0.33
SGCA-201ENST00000262018 IL17CQ9P0M4 197 aa13□□□□□ -0.33
SGCA-201ENST00000262018 CORO1CQ9ULV4 474 aaPredicted RBP13□□□□□ -0.33
SGCA-201ENST00000262018 PHTF1Q9UMS5 762 aa13□□□□□ -0.33
SGCA-201ENST00000262018 PPIL1Q9Y3C6 166 aa13□□□□□ -0.33
SGCA-201ENST00000262018 MAP4K5Q9Y4K4 846 aa13□□□□□ -0.33
SGCA-201ENST00000262018 OR1A2Q9Y585 309 aa13□□□□□ -0.33
SGCA-201ENST00000262018 WDR91A4D1P6 747 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 RHPN2P1A8MT19 583 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 STX7O15400 261 aaKnown RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 EDF1O60869 148 aaKnown RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 PROCP04070 461 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 PDGFAP04085 211 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 BPGMP07738 259 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 STMN1P16949 149 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 CTPS1P17812 591 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 MAZP56270 477 aaKnown RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 TAS2R39P59534 338 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 SEMA3AQ14563 771 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 ITIH4Q14624 930 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 CLPPQ16740 277 aaPredicted RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 CCDC153Q494R4 210 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 FASTKD1Q53R41 847 aaKnown RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 TIPARPQ7Z3E1 657 aaKnown RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 SDCCAG8Q86SQ7 713 aaPredicted RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 PLD6Q8N2A8 252 aaKnown RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 GBP7Q8N8V2 638 aaPredicted RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 GPATCH11Q8N954 259 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 RAB3IL1Q8TBN0 382 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 ELMO2Q96JJ3 720 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 WDR92Q96MX6 357 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 LYSMD1Q96S90 227 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 TCF12Q99081 682 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 PITPNM3Q9BZ71 974 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 PCDH12Q9NPG4 1184 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 INTS10Q9NVR2 710 aaKnown RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 TMEM216Q9P0N5 145 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 FKBPLQ9UIM3 349 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 TLK1Q9UKI8 766 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 COQ6Q9Y2Z9 468 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 MRPS18BQ9Y676 258 aaKnown RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 SPENQ96T58 3664 aaKnown RBP12.99□□□□□ -0.33
SGCA-201ENST00000262018 CSMD1Q96PZ7 3565 aa12.99□□□□□ -0.33
SGCA-201ENST00000262018 B4E171 279 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 ZW10O43264 779 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 SNX3O60493 162 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 LDLRP01130 860 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms