RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 TMEM173Q86WV6 379 aaPredicted RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 DCP2Q8IU60 420 aaKnown RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 SYTL1Q8IYJ3 562 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 GPR150Q8NGU9 434 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 CHPT1Q8WUD6 406 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 TRUB1Q8WWH5 349 aaKnown RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 SELENOMQ8WWX9 145 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 TRIB3Q96RU7 358 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 RBM4BQ9BQ04 359 aaKnown RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 RBM4Q9BWF3 364 aaKnown RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 CRLS1Q9UJA2 301 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 GNPTGQ9UJJ9 305 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 MYO16Q9Y6X6 1858 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 GREB1Q4ZG55 1949 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 ZNF701M0R085 212 aaPredicted RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 RAD51BO15315 384 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 TULP3O75386 442 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 PGLSO95336 258 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 CLDN7O95471 211 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 OTCP00480 354 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 FAM163BP0C2L3 166 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 GSTM2P28161 218 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 GTF2E2P29084 291 aaKnown RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 S100A3P33764 101 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 TRAF3Q13114 568 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 COL9A2Q14055 689 aaPredicted RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 KCNA10Q16322 511 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 NFE2Q16621 373 aaPredicted RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 TAS1R1Q7RTX1 841 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 EFL1Q7Z2Z2 1120 aaKnown RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 HORMAD1Q86X24 394 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 ADHFE1Q8IWW8 467 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 LMNTD1Q8N9Z9 388 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 ISG20Q96AZ6 181 aaKnown RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 RUBCNLQ9H714 662 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 HMG20AQ9NP66 347 aa12.94□□□□□ -0.34
PGBD1-201ENST00000259883 SAMHD1Q9Y3Z3 626 aaKnown RBP12.94□□□□□ -0.34
PGBD1-201ENST00000259883 WASH4PA8MWX3 477 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 STX16O14662 325 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 TAPBPO15533 448 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 KLKB1P03952 638 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 BCKDHAP12694 445 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 GNPDA1P46926 289 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 IDH2P48735 452 aaKnown RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 HUNKP57058 714 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 ISL1P61371 349 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 ACVR1Q04771 509 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 SFSWAPQ12872 951 aaKnown RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 BOP1Q14137 746 aaKnown RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 UAP1L1Q3KQV9 507 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 SPRYD7Q5W111 196 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 PDE12Q6L8Q7 609 aaKnown RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 RGMBQ6NW40 437 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 RFLNAQ6ZTI6 216 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 USP50Q70EL3 339 aaPredicted RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 B3GNT8Q7Z7M8 397 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 RTN4RL1Q86UN2 441 aaPredicted RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 SERINC5Q86VE9 423 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 SCML4Q8N228 414 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 PAPD5Q8NDF8 572 aaKnown RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 GTF3C2Q8WUA4 911 aaPredicted RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 HDAC2Q92769 488 aaKnown RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 MAL2Q969L2 176 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 ATP13A3Q9H7F0 1226 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 ZBTB20Q9HC78 741 aaPredicted RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 ARL15Q9NXU5 204 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 CD84Q9UIB8 345 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 POU2F3Q9UKI9 436 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 PFDN6O15212 129 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 RGS14O43566 566 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 DNTTP04053 509 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 ELNP15502 786 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 PPP2R2BQ00005 443 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 GSTM4Q03013 218 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 CTF1Q16619 201 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 INAVAQ3KP66 663 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 NIPAL1Q6NVV3 410 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 FAM180BQ6P0A1 224 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 LSRQ86X29 649 aaPredicted RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 CLIP4Q8N3C7 705 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 TERB1Q8NA31 727 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 PROX1Q92786 737 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 FKBP10Q96AY3 582 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 KCNC2Q96PR1 638 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 PSKH2Q96QS6 385 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 TANC1Q9C0D5 1861 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 DOCK4Q8N1I0 1966 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 A0A096LPI6 279 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 AREL1O15033 823 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 ACSL4O60488 711 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 C21orf33P30042 268 aaPredicted RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 P2RY8Q86VZ1 359 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 HEATR4Q86WZ0 1026 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 ZNF513Q8N8E2 541 aaPredicted RBP12.93□□□□□ -0.34
PGBD1-201ENST00000259883 FAR1Q8WVX9 515 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 RHBDF1Q96CC6 855 aa12.93□□□□□ -0.34
PGBD1-201ENST00000259883 REXO5Q96IC2 774 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms