RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 A0A1W2PQ67 120 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 PGLSO95336 258 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 CAMK1Q14012 370 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 TRIM2Q9C040 744 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 OR51V1Q9H2C8 321 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 DUS2Q9NX74 493 aaKnown RBP13.2□□□□□ -0.3
ALPK3-201ENST00000258888 SIX3O95343 332 aaPredicted RBP13.2□□□□□ -0.3
ALPK3-201ENST00000258888 TBX18O95935 607 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 CMPK1P30085 196 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 GNALP38405 381 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 NSG1P42857 185 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 NFKB2Q00653 900 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 SLC35G5Q96KT7 338 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 KCNN2Q9H2S1 579 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 RPS24P62847 133 aaKnown RBP13.2□□□□□ -0.3
ALPK3-201ENST00000258888 HMGCS1Q01581 520 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 TARDBPQ13148 414 aaKnown RBP eCLIP13.2□□□□□ -0.3
ALPK3-201ENST00000258888 HERC3Q15034 1050 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 SRFBP1Q8NEF9 429 aaKnown RBP13.2□□□□□ -0.3
ALPK3-201ENST00000258888 SLC35B2Q8TB61 432 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 SLIT2O94813 1529 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
ALPK3-201ENST00000258888 STXBP1P61764 594 aaKnown RBP13.2□□□□□ -0.3
ALPK3-201ENST00000258888 TXNL4AP83876 142 aaKnown RBP13.2□□□□□ -0.3
ALPK3-201ENST00000258888 TNFAIP8L3Q5GJ75 292 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 OR8H1Q8NGG4 311 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 EZH1Q92800 747 aaPredicted RBP13.2□□□□□ -0.3
ALPK3-201ENST00000258888 OR52B2Q96RD2 323 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 HEPHQ9BQS7 1158 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 DNAJB9Q9UBS3 223 aa13.2□□□□□ -0.3
ALPK3-201ENST00000258888 EFCAB9A8MZ26 197 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 DBIP07108 87 aaKnown RBP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 CKMT2P17540 419 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 FECHP22830 423 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 MSS51Q4VC12 460 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 KCNC2Q96PR1 638 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 ANXA2P2A6NMY6 339 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 PRAMEF10O60809 474 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 ANXA2P07355 339 aaKnown RBP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 SLC35G6P0C7Q6 338 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 PTGS2P35354 604 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 PRKD1Q15139 912 aaPredicted RBP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 IDNKQ5T6J7 187 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 UFD1Q92890 307 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 GADD45GO95257 159 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 NAT8LQ8N9F0 302 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 GAL3ST1Q99999 423 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 DCLK1O15075 740 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 TBX1O43435 398 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 GHDCQ8N2G8 530 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 ZNF395Q9H8N7 513 aaPredicted RBP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 RUVBL1Q9Y265 456 aaKnown RBP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 ROBO1Q9Y6N7 1651 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 FKBP1BP68106 108 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 EVA1BQ9NVM1 165 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 DOCK8Q8NF50 2099 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 LRRC72A6NJI9 287 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 ADAM17P78536 824 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 FATE1Q969F0 183 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 IL1RAPQ9NPH3 570 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 CABIN1Q9Y6J0 2220 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 AVPR1BP47901 424 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 OLIG2Q13516 323 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 ABCB8Q9NUT2 735 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 DNAAF2Q9NVR5 837 aaKnown RBP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 A0A0X1KG70 313 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 DDX6P26196 483 aaKnown RBP eCLIP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 MC1RQ01726 317 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 NCBP2-AS2Q69YL0 99 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 USP43Q70EL4 1123 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 CCDC36Q8IYA8 594 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 PRSS58Q8IYP2 241 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 TWNKQ96RR1 684 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 TOR3AQ9H497 397 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 TFB2MQ9H5Q4 396 aaKnown RBP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 ARHGEF17Q96PE2 2063 aaPredicted RBP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 GAD2Q05329 585 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 ADNP2Q6IQ32 1131 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 ZFP3Q96NJ6 502 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 CHMP1AQ9HD42 196 aaPredicted RBP13.19□□□□□ -0.3
ALPK3-201ENST00000258888 DUOX1Q9NRD9 1551 aa13.19□□□□□ -0.3
ALPK3-201ENST00000258888 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 A0A0G2JN53 185 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 NCBP2P52298 156 aaKnown RBP eCLIP13.18□□□□□ -0.3
ALPK3-201ENST00000258888 CDH15P55291 814 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 LRP10Q7Z4F1 713 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 PHTF2Q8N3S3 785 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 AKTIPQ9H8T0 292 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 DUSP11O75319 330 aaKnown RBP13.18□□□□□ -0.3
ALPK3-201ENST00000258888 IMPDH1P20839 514 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 EIF2S3P41091 472 aaKnown RBP13.18□□□□□ -0.3
ALPK3-201ENST00000258888 AP3S2P59780 193 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 COX18Q8N8Q8 333 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 CANT1Q8WVQ1 401 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 PIK3R3Q92569 461 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 PFDN2Q9UHV9 154 aa13.18□□□□□ -0.3
ALPK3-201ENST00000258888 ORC5O43913 435 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms