RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ADHFE1Q8IWW8 467 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 CNTD1Q8N815 330 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF564Q8TBZ8 553 aaPredicted RBP6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 DCAKDQ8WVC6 231 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 MOCOSQ96EN8 888 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 NLNQ9BYT8 704 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 TXLNGYQ9BZA5 131 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 CHIAQ9BZP6 476 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 MIR1-1HGQ9H1L0 117 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 ANKRA2Q9H9E1 313 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 GPRC5BQ9NZH0 403 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 GCNT4Q9P109 453 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 EXOGQ9Y2C4 368 aaKnown RBP6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 PHRF1Q9P1Y6 1649 aaKnown RBP6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 ROBO1Q9Y6N7 1651 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 A0A1B0GV90 55 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 C20orf202A1L168 122 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 C5orf51A6NDU8 294 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 AGRPO00253 132 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 PRMT5O14744 637 aaPredicted RBP6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 LRRC37A3O60309 1634 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 XYLBO75191 536 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 SERPINF2P08697 491 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 CNPP09543 421 aaKnown RBP6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 PRELPP51888 382 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 NDST2P52849 883 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 ELP6Q0PNE2 266 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 CCNIQ14094 377 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 TFDP2Q14188 446 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 PCBP1Q15365 356 aaKnown RBP eCLIP6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 TMEM236Q5W0B7 351 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 ATCAYQ86WG3 371 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 SKA3Q8IX90 412 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 IZUMO1Q8IYV9 350 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 SVOPLQ8N434 492 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 TXNDC5Q8NBS9 432 aaKnown RBP6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 BEST4Q8NFU0 473 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 NPRL2Q8WTW4 380 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 LRRC46Q96FV0 321 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 SERAC1Q96JX3 654 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 MEGF10Q96KG7 1140 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF559Q9BR84 538 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 BHLHE41Q9C0J9 482 aaPredicted RBP6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 PCDH9Q9HC56 1237 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 RANGRFQ9HD47 186 aaPredicted RBP6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 NEUROD4Q9HD90 331 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 C11orf16Q9NQ32 467 aa6.63□□□□□ -1.35
PDGFRA-201ENST00000257290 A0A1B0GVI7 797 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TRAPPC13A5PLN9 417 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 EI24O14681 340 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TNFRSF10BO14763 440 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SDC3O75056 442 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CSTAP01040 98 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 MPOP05164 745 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ADH1AP07327 375 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 STAG3L3P0CL85 134 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TSPAN8P19075 237 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 DCKP27707 260 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 MAP2K3P46734 347 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 LEPRP48357 1165 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 KCNC1P48547 511 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TGM4P49221 684 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 RORCP51449 518 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 GALCP54803 685 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 EMP3P54852 163 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 FSTL1Q12841 308 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SCGB2A2Q13296 93 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 NT5DC1Q5TFE4 455 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 PKN3Q6P5Z2 889 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 GPR142Q7Z601 462 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 RBM23Q86U06 439 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ADIPOR2Q86V24 386 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF276Q8N554 614 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 RBCK1Q9BYM8 510 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 KLHL21Q9UJP4 597 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CNTNAP5Q8WYK1 1306 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 WASH4PA8MWX3 477 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 DLGAP1O14490 977 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CDK14O94921 469 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 POP4O95707 220 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ACADMP11310 421 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CYP2A6P11509 494 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CKMT2P17540 419 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CRABP1P29762 137 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ECHS1P30084 290 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CDH5P33151 784 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 NNMTP40261 264 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 MAP3K8P41279 467 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TKFCQ3LXA3 575 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TEX30Q5JUR7 227 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 GLRA4Q5JXX5 417 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 GPR158Q5T848 1215 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 HIST2H3PS2Q5TEC6 136 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CDC73Q6P1J9 531 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 C3P1Q6ZMU1 363 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 HID1Q8IV36 788 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 PGAM4Q8N0Y7 254 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 YIPF7Q8N8F6 280 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 OR10R2Q8NGX6 335 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ZDHHC1Q8WTX9 485 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms