RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ZNF549Q6P9A3 640 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 IGDCC3Q8IVU1 814 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.19■■□□□ 1.14
LSM4-201ENST00000252816 GSDMBQ8TAX9 411 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 WBP1Q96G27 269 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 IL17FQ96PD4 163 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 EBNA1BP2Q99848 306 aaKnown RBP22.19■■□□□ 1.14
LSM4-201ENST00000252816 LATS2Q9NRM7 1088 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 RNF14Q9UBS8 474 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 TSR3Q9UJK0 312 aaKnown RBP22.19■■□□□ 1.14
LSM4-201ENST00000252816 CROTQ9UKG9 612 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 KRT87PA6NCN2 255 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 TK2O00142 265 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 TERTO14746 1132 aaKnown RBP22.18■■□□□ 1.14
LSM4-201ENST00000252816 KDM1AO60341 852 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 C1orf105O95561 183 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 BDKRB1P46663 353 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 MPP1Q00013 466 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 MORF4L2Q15014 288 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 ZIC1Q15915 447 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 LINC00303Q3SY05 128 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 BBS9Q3SYG4 887 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 CCSMST1Q4G0I0 132 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 HSP90AA5PQ58FG0 334 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 ACSBG2Q5FVE4 666 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 FAM20CQ8IXL6 584 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 C2orf73Q8N5S3 287 aaPredicted RBP22.18■■□□□ 1.14
LSM4-201ENST00000252816 ZBTB2Q8N680 514 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 OR8K5Q8NH50 307 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 SKA2Q8WVK7 121 aaPredicted RBP22.18■■□□□ 1.14
LSM4-201ENST00000252816 EXTL1Q92935 676 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 KRT12Q99456 494 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 SLC30A3Q99726 388 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 AKIRIN1Q9H9L7 192 aaPredicted RBP22.18■■□□□ 1.14
LSM4-201ENST00000252816 FAM60AQ9NP50 221 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 FBXO5Q9UKT4 447 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 MED16Q9Y2X0 877 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 MRPS18BQ9Y676 258 aaKnown RBP22.18■■□□□ 1.14
LSM4-201ENST00000252816 SPTBP11277 2137 aa22.18■■□□□ 1.14
LSM4-201ENST00000252816 ISM1B1AKI9 464 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 TMEM150CB9EJG8 249 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 TP73O15350 636 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 NKX2-8O15522 239 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 SCRG1O75711 98 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 ITGB2P05107 769 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 MSL3P1P0C860 447 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 DLSTP36957 453 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 CLCN7P51798 805 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 LY6DQ14210 128 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 KIR2DS3Q14952 304 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 HIBCHQ6NVY1 386 aaPredicted RBP22.17■■□□□ 1.14
LSM4-201ENST00000252816 CNSTQ6PJW8 725 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 CDHR3Q6ZTQ4 885 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 KCNMB4Q86W47 210 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 TMEM126BQ8IUX1 230 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 C19orf47Q8N9M1 422 aaKnown RBP22.17■■□□□ 1.14
LSM4-201ENST00000252816 SLC38A9Q8NBW4 561 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 OR1L3Q8NH93 324 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 CALML6Q8TD86 181 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 EFHD1Q9BUP0 239 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 SEMA4CQ9C0C4 833 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 PLAC1Q9HBJ0 212 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 LHX9Q9NQ69 397 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 IARS2Q9NSE4 1012 aaKnown RBP22.17■■□□□ 1.14
LSM4-201ENST00000252816 PADI1Q9ULC6 663 aa22.17■■□□□ 1.14
LSM4-201ENST00000252816 CFAP46Q8IYW2 2715 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 A0A0J9YY10 115 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 EIF4E1BA6NMX2 242 aaKnown RBP22.16■■□□□ 1.14
LSM4-201ENST00000252816 ZNF891A8MT65 544 aaPredicted RBP22.16■■□□□ 1.14
LSM4-201ENST00000252816 E5RI56 91 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 RASGRF2O14827 1237 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 C1QL1O75973 258 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 MATN4O95460 622 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 MT-ND3P03897 115 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 ERVK-10P10266 1014 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 CD9P21926 228 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 ATP5DP30049 168 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 ITGA8P53708 1063 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 MRPS25P82663 173 aaKnown RBP22.16■■□□□ 1.14
LSM4-201ENST00000252816 TBR1Q16650 682 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 HP1BP3Q5SSJ5 553 aaPredicted RBP22.16■■□□□ 1.14
LSM4-201ENST00000252816 TAX1BP1Q86VP1 789 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 LMNTD2Q8IXW0 634 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 OR2L8Q8NGY9 312 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 GIMAP7Q8NHV1 300 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 STARD8Q92502 1023 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 WDR83Q9BRX9 315 aaKnown RBP22.16■■□□□ 1.14
LSM4-201ENST00000252816 TRIM31Q9BZY9 425 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 FANCEQ9HB96 536 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 SYTL2Q9HCH5 934 aa22.16■■□□□ 1.14
LSM4-201ENST00000252816 HCRTR1O43613 425 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 CPNE3O75131 537 aaKnown RBP22.15■■□□□ 1.14
LSM4-201ENST00000252816 HAUS5O94927 633 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 SEC31AO94979 1220 aaKnown RBP22.15■■□□□ 1.14
LSM4-201ENST00000252816 TTC4O95801 387 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 CCNYL3P0C7X3 344 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 ETF1P62495 437 aaKnown RBP22.15■■□□□ 1.14
LSM4-201ENST00000252816 SLC5A12Q1EHB4 618 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 EXD3Q8N9H8 876 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 CT55Q8WUE5 264 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms