RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 RAVER1Q8IY67 606 aaKnown RBP14.37□□□□□ -0.11
MBD4-201ENST00000249910 LIX1Q8N485 282 aa14.37□□□□□ -0.11
MBD4-201ENST00000249910 TRAM1L1Q8N609 369 aa14.37□□□□□ -0.11
MBD4-201ENST00000249910 GLYATL1Q969I3 302 aa14.37□□□□□ -0.11
MBD4-201ENST00000249910 TRIM54Q9BYV2 358 aa14.37□□□□□ -0.11
MBD4-201ENST00000249910 SMOXQ9NWM0 555 aa14.37□□□□□ -0.11
MBD4-201ENST00000249910 GULP1Q9UBP9 304 aa14.37□□□□□ -0.11
MBD4-201ENST00000249910 LEF1Q9UJU2 399 aaPredicted RBP14.37□□□□□ -0.11
MBD4-201ENST00000249910 TCF20Q9UGU0 1960 aaKnown RBP14.37□□□□□ -0.11
MBD4-201ENST00000249910 CROCCQ5TZA2 2017 aa14.37□□□□□ -0.11
MBD4-201ENST00000249910 ALPK3Q96L96 1907 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 TBC1D3BA6NDS4 549 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 RFXAPO00287 272 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 HOXC11O43248 304 aaPredicted RBP14.36□□□□□ -0.11
MBD4-201ENST00000249910 RGS14O43566 566 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 CKMT2P17540 419 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 GNPDA1P46926 289 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 GSK3BP49841 420 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 ERAP2Q6P179 960 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 TMEM220Q6QAJ8 160 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 DPPA4Q7L190 304 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 DDHD1Q8NEL9 900 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 PIP4K2CQ8TBX8 421 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 UBTD2Q8WUN7 234 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 SELENOMQ8WWX9 145 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 SMARCD2Q92925 531 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 CIB1Q99828 191 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 ZNF106Q9H2Y7 1883 aaKnown RBP14.36□□□□□ -0.11
MBD4-201ENST00000249910 SPATA7Q9P0W8 599 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 SPEGQ15772 3267 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 WNT9AO14904 365 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 ARPC2O15144 300 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 MMP20O60882 483 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 SH3BGRLO75368 114 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 B3GALT4O96024 378 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 SRPRAP08240 638 aaKnown RBP14.36□□□□□ -0.11
MBD4-201ENST00000249910 SHHQ15465 462 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 C6orf52Q5T4I8 152 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 TANGO2Q6ICL3 276 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 DLEU7Q6UYE1 221 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 MMAAQ8IVH4 418 aaKnown RBP14.36□□□□□ -0.11
MBD4-201ENST00000249910 GALNT15Q8N3T1 639 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 OR2T34Q8NGX1 318 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 OR2T3Q8NH03 318 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 MCOLN3Q8TDD5 553 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 ARRDC3Q96B67 414 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 DTNBP1Q96EV8 351 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 PPP3R2Q96LZ3 170 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 MTIF3Q9H2K0 278 aaKnown RBP14.36□□□□□ -0.11
MBD4-201ENST00000249910 LRTM1Q9HBL6 345 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 DLGAP4Q9Y2H0 992 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 SLC27A6Q9Y2P4 619 aa14.36□□□□□ -0.11
MBD4-201ENST00000249910 TSPAN11A1L157 253 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 PABPN1LA6NDY0 278 aaKnown RBP14.35□□□□□ -0.11
MBD4-201ENST00000249910 A6NHS1 94 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 SOBPA7XYQ1 873 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 ARHGEF33A8MVX0 844 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 AKAP10O43572 662 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 PEX1O43933 1283 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 RECQL5O94762 991 aaPredicted RBP14.35□□□□□ -0.11
MBD4-201ENST00000249910 MT-ND1P03886 318 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 C8GP07360 202 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 TCF3P15923 654 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 DCDC1P59894 354 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 CDKL1Q00532 357 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 ZNF234Q14588 700 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 SPANXN4Q5MJ08 99 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 PLEKHS1Q5SXH7 462 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 HMBOX1Q6NT76 420 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 TRIM46Q7Z4K8 759 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 TICAM1Q8IUC6 712 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 USP7Q93009 1102 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 GFM2Q969S9 779 aaKnown RBP14.35□□□□□ -0.11
MBD4-201ENST00000249910 TMEM159Q96B96 161 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 MED8Q96G25 268 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 EGLN2Q96KS0 407 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 TSC22D3Q99576 134 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 SLC29A1Q99808 456 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 FAM83CQ9BQN1 747 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 ELOVL6Q9H5J4 265 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 COQ10BQ9H8M1 238 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 DPP7Q9UHL4 492 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 SCOCQ9UIL1 159 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 MAGEA13PA6NCF6 341 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 MAP3K13O43283 966 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 SLCO2B1O94956 709 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 SOD1P00441 154 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 HSD17B1P14061 328 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 TACR1P25103 407 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 SLC7A1P30825 629 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 HALP42357 657 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 PFN3P60673 137 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 GRM2Q14416 872 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 SF1Q15637 639 aaKnown RBP14.35□□□□□ -0.11
MBD4-201ENST00000249910 HNRNPA1L2Q32P51 320 aaKnown RBP14.35□□□□□ -0.11
MBD4-201ENST00000249910 SYTL3Q4VX76 610 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 COQ5Q5HYK3 327 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 TSPEARQ8WU66 669 aa14.35□□□□□ -0.11
MBD4-201ENST00000249910 KCTD14Q9BQ13 255 aaPredicted RBP14.35□□□□□ -0.11
MBD4-201ENST00000249910 OR2AG1Q9H205 316 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms