RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 DLGAP4Q9Y2H0 992 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 A0A1B0GTW7 788 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 CFAP99D6REC4 459 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 PLOD2O00469 737 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 TFAP2AP05549 437 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 ATP6V1B1P15313 513 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 XPAP23025 273 aaPredicted RBP21.13■□□□□ 0.97
CLN6-201ENST00000249806 HOXA9P31269 272 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 DGKGP49619 791 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 HNMTP50135 292 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 PLOD1Q02809 727 aaPredicted RBP21.13■□□□□ 0.97
CLN6-201ENST00000249806 LILRA3Q8N6C8 439 aaPredicted RBP21.13■□□□□ 0.97
CLN6-201ENST00000249806 MCOLN3Q8TDD5 553 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 OTUB2Q96DC9 234 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 CENPNQ96H22 339 aaPredicted RBP21.13■□□□□ 0.97
CLN6-201ENST00000249806 ELOVL6Q9H5J4 265 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 FBXO10Q9UK96 956 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 OAZ3Q9UMX2 235 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 MRPS23Q9Y3D9 190 aaKnown RBP21.13■□□□□ 0.97
CLN6-201ENST00000249806 PCDHB3Q9Y5E6 796 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 PLXNA2O75051 1894 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 KCNE1BA0A087WTH5 132 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 LINC01553A4QN01 128 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 PABPN1LA6NDY0 278 aaKnown RBP21.13■□□□□ 0.97
CLN6-201ENST00000249806 CYP17A1P05093 508 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 CISD3P0C7P0 127 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 MYOGP15173 224 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 CYP2A7P20853 494 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 DCDC1P59894 354 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 TXNL4AP83876 142 aaKnown RBP21.13■□□□□ 0.97
CLN6-201ENST00000249806 ABRQ12979 859 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 DNAJC14Q6Y2X3 702 aaPredicted RBP21.13■□□□□ 0.97
CLN6-201ENST00000249806 PRR23BQ6ZRT6 265 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 RTL10Q7L3V2 364 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 PROSER1Q86XN7 944 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 TCAIMQ8N3R3 496 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 RNF175Q8N4F7 328 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 TRAM1L1Q8N609 369 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 ASZ1Q8WWH4 475 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 ZNF583Q96ND8 569 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 IKZF5Q9H5V7 419 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 CLMPQ9H6B4 373 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 CIDEBQ9UHD4 219 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 SLC8A2Q9UPR5 921 aa21.13■□□□□ 0.97
CLN6-201ENST00000249806 TSPAN11A1L157 253 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 DLGAP1O14490 977 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 AREL1O15033 823 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 CLPTM1O96005 669 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 METAP1P53582 386 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 CTSCP53634 463 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 TECPR1Q7Z6L1 1165 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 CARM1Q86X55 608 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 SLC22A15Q8IZD6 547 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 LEMD2Q8NC56 503 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 DDHD1Q8NEL9 900 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 ZNF707Q96C28 371 aaPredicted RBP21.12■□□□□ 0.97
CLN6-201ENST00000249806 RSPRY1Q96DX4 576 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 ZNF696Q9H7X3 374 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 SLC24A3Q9HC58 644 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 KPNA5O15131 536 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 TSPAN6O43657 245 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 OR6B1O95007 311 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 HNRNPA1P09651 372 aaKnown RBP eCLIP21.12■□□□□ 0.97
CLN6-201ENST00000249806 VIPR2P41587 438 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 PFN3P60673 137 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 INTS11Q5TA45 600 aaKnown RBP21.12■□□□□ 0.97
CLN6-201ENST00000249806 TTC23LQ6PF05 361 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 RASGEF1AQ8N9B8 481 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 GLB1L3Q8NCI6 653 aaPredicted RBP21.12■□□□□ 0.97
CLN6-201ENST00000249806 BTN2A2Q8WVV5 523 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 OR52E6Q96RD3 313 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 ZSCAN5AQ9BUG6 496 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 THUMPD3Q9BV44 507 aaKnown RBP21.12■□□□□ 0.97
CLN6-201ENST00000249806 SLC25A37Q9NYZ2 338 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 PRKAG2Q9UGJ0 569 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 SNX6Q9UNH7 406 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 UNC80Q8N2C7 3258 aa21.12■□□□□ 0.97
CLN6-201ENST00000249806 RNF103-CHMP3A0A140T963 221 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 ACOX3O15254 700 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 IL6P05231 212 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 PABPC4LP0CB38 370 aaKnown RBP21.11■□□□□ 0.97
CLN6-201ENST00000249806 UMPSP11172 480 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 TACR1P25103 407 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 POLE2P56282 527 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 PHC1P78364 1004 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 PYCR3Q53H96 274 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 LIPIQ6XZB0 460 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 MSRB3Q8IXL7 192 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 RAVER1Q8IY67 606 aaKnown RBP21.11■□□□□ 0.97
CLN6-201ENST00000249806 PAPD5Q8NDF8 572 aaKnown RBP21.11■□□□□ 0.97
CLN6-201ENST00000249806 OR8J3Q8NGG0 315 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 OR10A6Q8NH74 314 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 NSMCE2Q96MF7 247 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 RNF145Q96MT1 663 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 WRAP53Q9BUR4 548 aaKnown RBP21.11■□□□□ 0.97
CLN6-201ENST00000249806 SLC6A13Q9NSD5 602 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 ASIC5Q9NY37 505 aa21.11■□□□□ 0.97
CLN6-201ENST00000249806 SOBPA7XYQ1 873 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 SLC16A5O15375 505 aa21.1■□□□□ 0.97
CLN6-201ENST00000249806 SLCO2B1O94956 709 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms