RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 HOXD1Q9GZZ0 328 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 MKRN2Q9H000 416 aaKnown RBP13.04□□□□□ -0.32
CCDC117-201ENST00000249064 C8orf4Q9NR00 106 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 TMEM181Q9P2C4 612 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 CDH7Q9ULB5 785 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 THSD7AQ9UPZ6 1657 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 A0A1W2PRG6 482 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 HAT1O14929 419 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 TLR5O60602 858 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 AKIRIN2Q53H80 203 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 ASB18Q6ZVZ8 466 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 CHDHQ8NE62 594 aaPredicted RBP13.04□□□□□ -0.32
CCDC117-201ENST00000249064 MMP27Q9H306 513 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 CCNB1IP1Q9NPC3 277 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 SMPD4Q9NXE4 827 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 SESN1Q9Y6P5 492 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 TRAV19A0A0A6YYK7 116 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 CBX4O00257 560 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 UGT2B11O75310 529 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 C9P02748 559 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 PRKCAP17252 672 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 MYL9P24844 172 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 S100A3P33764 101 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 GPR15P49685 360 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 RENBPP51606 427 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 FOXA1P55317 472 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 SLC10A7Q0GE19 358 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 ARHGEF7Q14155 803 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 PAFAH1B3Q15102 231 aaKnown RBP13.04□□□□□ -0.32
CCDC117-201ENST00000249064 CPSF6Q16630 551 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCDC117-201ENST00000249064 KIAA1841Q6NSI8 718 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 GLB1LQ6UWU2 654 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 RASAL3Q86YV0 1011 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 TICAM1Q8IUC6 712 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 ATP6V0D2Q8N8Y2 350 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 OR56A4Q8NGH8 313 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 PSMG2Q969U7 264 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 GPN2Q9H9Y4 310 aaPredicted RBP13.04□□□□□ -0.32
CCDC117-201ENST00000249064 ING4Q9UNL4 249 aa13.04□□□□□ -0.32
CCDC117-201ENST00000249064 ARID1BQ8NFD5 2236 aaPredicted RBP13.04□□□□□ -0.32
CCDC117-201ENST00000249064 LRRC37AA6NMS7 1700 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 A0A096LPI6 279 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 AP3D1O14617 1153 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 KMOO15229 486 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 ACOX3O15254 700 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 HOXC11O43248 304 aaPredicted RBP13.03□□□□□ -0.32
CCDC117-201ENST00000249064 RAMP2O60895 175 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 FCER2P06734 321 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 C21orf33P30042 268 aaPredicted RBP13.03□□□□□ -0.32
CCDC117-201ENST00000249064 AXLP30530 894 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 PIGAP37287 484 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 PRIM2P49643 509 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 PTPN5P54829 565 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 ELP6Q0PNE2 266 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 TSNQ15631 228 aaKnown RBP13.03□□□□□ -0.32
CCDC117-201ENST00000249064 TIMM50Q3ZCQ8 353 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 LYSMD2Q8IV50 215 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 UBE2FQ969M7 185 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 GTPBP3Q969Y2 492 aaKnown RBP13.03□□□□□ -0.32
CCDC117-201ENST00000249064 ITPAQ9BY32 194 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 OR51E2Q9H255 320 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 EIF2B3Q9NR50 452 aaKnown RBP13.03□□□□□ -0.32
CCDC117-201ENST00000249064 PCDHGA11Q9Y5H2 935 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 PTGESO14684 152 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 GPR32O75388 356 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 TSTQ16762 297 aaKnown RBP13.03□□□□□ -0.32
CCDC117-201ENST00000249064 KIAA0319Q5VV43 1072 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 PTRHD1Q6GMV3 140 aaKnown RBP13.03□□□□□ -0.32
CCDC117-201ENST00000249064 SIGIRRQ6IA17 410 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 STAG3L4Q8TBR4 150 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 FAM45AQ8TCE6 357 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 FRMD6Q96NE9 622 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 IL4I1Q96RQ9 567 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 ZNF490Q9ULM2 529 aaPredicted RBP13.03□□□□□ -0.32
CCDC117-201ENST00000249064 A0A1W2PP18 115 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 H0YAE9 185 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 TEX46H3BTG2 121 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 SSNA1O43805 119 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 IFITM3Q01628 133 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 STARD3Q14849 445 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 STEAP4Q687X5 459 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 DCLRE1AQ6PJP8 1040 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 GPRIN3Q6ZVF9 776 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 COLGALT2Q8IYK4 626 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 LSMEM2Q8N112 164 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 PARP16Q8N5Y8 322 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 TANKQ92844 425 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 RIT1Q92963 219 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 TRIM54Q9BYV2 358 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 PPIL3Q9H2H8 161 aaKnown RBP13.03□□□□□ -0.32
CCDC117-201ENST00000249064 DNAJC15Q9Y5T4 150 aa13.03□□□□□ -0.32
CCDC117-201ENST00000249064 CHURC1-FNTBB4DL54 471 aa13.02□□□□□ -0.32
CCDC117-201ENST00000249064 M0R129 80 aa13.02□□□□□ -0.32
CCDC117-201ENST00000249064 DFNA5O60443 496 aa13.02□□□□□ -0.32
CCDC117-201ENST00000249064 WARSP23381 471 aaKnown RBP13.02□□□□□ -0.32
CCDC117-201ENST00000249064 CLPPQ16740 277 aaPredicted RBP13.02□□□□□ -0.32
CCDC117-201ENST00000249064 CYP27C1Q4G0S4 372 aa13.02□□□□□ -0.32
CCDC117-201ENST00000249064 CTXN3Q4LDR2 81 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms