RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CD9P21926 228 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 ELK3P41970 407 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 RPL21P46778 160 aaKnown RBP12.36□□□□□ -0.43
VPREB3-201ENST00000248948 CLCN7P51798 805 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 MPP1Q00013 466 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 RHDQ02161 417 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 ABHD18Q0P651 414 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 GRB7Q14451 532 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 KCNAB1Q14722 419 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 SLC5A12Q1EHB4 618 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 ZNF789Q5FWF6 425 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 LRRC8EQ6NSJ5 796 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 RASGRP3Q8IV61 690 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 IL22RA1Q8N6P7 574 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 OR2L8Q8NGY9 312 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 GIMAP7Q8NHV1 300 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 FLVCR1-AS1Q8TAF5 88 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 SKA2Q8WVK7 121 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-201ENST00000248948 KIAA1143Q96AT1 154 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-201ENST00000248948 RAD51AP1Q96B01 352 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 SLC22A18Q96BI1 424 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 ZNF501Q96CX3 271 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-201ENST00000248948 UBL7Q96S82 380 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-201ENST00000248948 ERP44Q9BS26 406 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 EFHD1Q9BUP0 239 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 TRIM31Q9BZY9 425 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 PHACTR1Q9C0D0 580 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 CHRNA10Q9GZZ6 450 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 PLAC1Q9HBJ0 212 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 FAM114A2Q9NRY5 505 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 IARS2Q9NSE4 1012 aaKnown RBP12.36□□□□□ -0.43
VPREB3-201ENST00000248948 SPATA7Q9P0W8 599 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 CORO1CQ9ULV4 474 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-201ENST00000248948 MED16Q9Y2X0 877 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 FER1L5A0AVI2 2057 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 SLC9B1P1A6NJY1 282 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 EFSO43281 561 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 RAD51CO43502 376 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 VPS26AO75436 327 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 FKBP9O95302 570 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 C1orf105O95561 183 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 TUBB4AP04350 444 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 CBSLP0DN79 551 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 ERVK-10P10266 1014 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 ST6GAL1P15907 406 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 CBSP35520 551 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 STAT5AP42229 794 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 ZNF549Q6P9A3 640 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 CNSTQ6PJW8 725 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 VASH2Q86V25 355 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 IGDCC3Q8IVU1 814 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 UNC5BQ8IZJ1 945 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 C19orf47Q8N9M1 422 aaKnown RBP12.35□□□□□ -0.43
VPREB3-201ENST00000248948 ZSCAN1Q8NBB4 408 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 HMGCLL1Q8TB92 370 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 CD200R1Q8TD46 325 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 PPM1MQ96MI6 270 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 TRAPPC9Q96Q05 1148 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 OR2A14Q96R47 310 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 AARSD1Q9BTE6 412 aaKnown RBP12.35□□□□□ -0.43
VPREB3-201ENST00000248948 CDC23Q9UJX2 597 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 PLAGL1Q9UM63 463 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 SNX24Q9Y343 169 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 ATMQ13315 3056 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 CACNA1GO43497 2377 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 PCM1Q15154 2024 aa12.35□□□□□ -0.43
VPREB3-201ENST00000248948 ERVH48-1M5A8F1 160 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 KIF2AO00139 706 aaPredicted RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 MYO1CO00159 1063 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 CPNE3O75131 537 aaKnown RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 PSIP1O75475 530 aaKnown RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 SPAG6O75602 509 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 KIAA0754O94854 1291 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 TIAF1O95411 115 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 CATP04040 527 aaKnown RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 MPC1LP0DKB6 136 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 ERGP11308 486 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 LIFP15018 202 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 ZNF28P17035 718 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 PEBP1P30086 187 aaKnown RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 BDKRB1P46663 353 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 CAV1Q03135 178 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 ABRQ12979 859 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 PDIA2Q13087 525 aaKnown RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 WHAMMP3Q1A5X7 153 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 KLHL38Q2WGJ6 581 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 ACSBG2Q5FVE4 666 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 ARHGAP40Q5TG30 622 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 DUPD1Q68J44 220 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 UGT3A1Q6NUS8 523 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 TIPARPQ7Z3E1 657 aaKnown RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 LINC01555Q8NAE3 123 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 FBXO15Q8NCQ5 510 aaPredicted RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 LSM14AQ8ND56 463 aaKnown RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 CFAP61Q8NHU2 1237 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 FAM136AQ96C01 138 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 CFAP36Q96G28 342 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms