RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SUSD6Q92537 303 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 FOXJ1Q92949 421 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 DUS3LQ96G46 650 aaKnown RBP18.02■□□□□ 0.48
HOXC11-201ENST00000243082 ACPTQ9BZG2 426 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 LRTM1Q9HBL6 345 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 PRSS16Q9NQE7 514 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 DNAJC11Q9NVH1 559 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 EIF3LQ9Y262 564 aaKnown RBP18.02■□□□□ 0.48
HOXC11-201ENST00000243082 ARNTLO00327 626 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 LILRB5O75023 590 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 IMPG1Q17R60 797 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 RABL3Q5HYI8 236 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 SLC2A7Q6PXP3 512 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 TMEM184AQ6ZMB5 413 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 SLCO4A1Q96BD0 722 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 ERLEC1Q96DZ1 483 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 LRGUKQ96M69 825 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 ASIC5Q9NY37 505 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 GRXCR2A6NFK2 248 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 SEC22BO75396 215 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 NPPAP01160 153 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 PDHA2P29803 388 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 AQP4P55087 323 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 DPTQ07507 201 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 BLMHQ13867 455 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 PTGR1Q14914 329 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 SPATS1Q496A3 300 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 CCSMST1Q4G0I0 132 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 IRGCQ6NXR0 463 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 SLC22A15Q8IZD6 547 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 TMEM102Q8N9M5 508 aaPredicted RBP18.01■□□□□ 0.47
HOXC11-201ENST00000243082 ZUFSPQ96AP4 578 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 DYRK4Q9NR20 520 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 BATF3Q9NR55 127 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 INTS7Q9NVH2 962 aaKnown RBP18.01■□□□□ 0.47
HOXC11-201ENST00000243082 C1orf109Q9NX04 203 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 AP4S1Q9Y587 144 aa18.01■□□□□ 0.47
HOXC11-201ENST00000243082 DOCK8Q8NF50 2099 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 LZTS3O60299 673 aaPredicted RBP18■□□□□ 0.47
HOXC11-201ENST00000243082 KAT7O95251 611 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 CAPNS1P04632 268 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 EPHX1P07099 455 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 ATP6V1B2P21281 511 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 VARSP26640 1264 aaKnown RBP18■□□□□ 0.47
HOXC11-201ENST00000243082 MAP4P27816 1152 aaKnown RBP18■□□□□ 0.47
HOXC11-201ENST00000243082 P2RY2P41231 377 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 CASP2P42575 452 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 GPR1P46091 355 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 NEK2P51955 445 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 DGKQP52824 942 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 HYAL1Q12794 435 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 GRAMD1BQ3KR37 738 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 BCL7AQ4VC05 210 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 RAET1GQ6H3X3 334 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 NANOGP8Q6NSW7 305 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 ANKRD54Q6NXT1 300 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 SUSD1Q6UWL2 747 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 DLEU7Q6UYE1 221 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 PLCD3Q8N3E9 789 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 SELENOMQ8WWX9 145 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 MYADMQ96S97 322 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 NANOGQ9H9S0 305 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 SNX6Q9UNH7 406 aa18■□□□□ 0.47
HOXC11-201ENST00000243082 ZFC3H1O60293 1989 aaKnown RBP18■□□□□ 0.47
HOXC11-201ENST00000243082 EIF4E1BA6NMX2 242 aaKnown RBP17.99■□□□□ 0.47
HOXC11-201ENST00000243082 IFRD1O00458 451 aaPredicted RBP17.99■□□□□ 0.47
HOXC11-201ENST00000243082 NPC1O15118 1278 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 PBLDP30039 288 aaPredicted RBP17.99■□□□□ 0.47
HOXC11-201ENST00000243082 KLC1Q07866 573 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 BNIP2Q12982 314 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 PLA2G4EQ3MJ16 856 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 EGFLAMQ63HQ2 1017 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 TICAM1Q8IUC6 712 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 LIX1Q8N485 282 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 MRPL38Q96DV4 380 aaKnown RBP17.99■□□□□ 0.47
HOXC11-201ENST00000243082 CCDC138Q96M89 665 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 HDAC8Q9BY41 377 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 OR2AG1Q9H205 316 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 SLC7A1P30825 629 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 BDKRB1P46663 353 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 GSK3BP49841 420 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 USP39Q53GS9 565 aaKnown RBP17.99■□□□□ 0.47
HOXC11-201ENST00000243082 CACHD1Q5VU97 1274 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 XKR5Q6UX68 686 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 DSG4Q86SJ6 1040 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 YAF2Q8IY57 180 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 OR2T34Q8NGX1 318 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 OR2T3Q8NH03 318 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 PPP2R3CQ969Q6 453 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 TMEM74Q96NL1 305 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 KXD1Q9BQD3 176 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 ELOVL6Q9H5J4 265 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 STOX2Q9P2F5 926 aaPredicted RBP17.99■□□□□ 0.47
HOXC11-201ENST00000243082 EGFL7Q9UHF1 273 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 MSRAQ9UJ68 235 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 DTNAQ9Y4J8 743 aa17.99■□□□□ 0.47
HOXC11-201ENST00000243082 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.98■□□□□ 0.47
HOXC11-201ENST00000243082 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.98■□□□□ 0.47
HOXC11-201ENST00000243082 C1QTNF3-AMACRE9PGA6 284 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 CATP04040 527 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms