RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 TUBB3Q13509 450 aa9.36□□□□□ -0.91
NUDCD1-201ENST00000239690 ARMC12Q5T9G4 340 aa9.36□□□□□ -0.91
NUDCD1-201ENST00000239690 ZNF280DQ6N043 979 aa9.36□□□□□ -0.91
NUDCD1-201ENST00000239690 SAMD7Q7Z3H4 446 aa9.36□□□□□ -0.91
NUDCD1-201ENST00000239690 TEX47Q8TBZ9 253 aa9.36□□□□□ -0.91
NUDCD1-201ENST00000239690 SMURF1Q9HCE7 757 aa9.36□□□□□ -0.91
NUDCD1-201ENST00000239690 PRDM8Q9NQV8 689 aa9.36□□□□□ -0.91
NUDCD1-201ENST00000239690 CMAHPQ9Y471 501 aa9.36□□□□□ -0.91
NUDCD1-201ENST00000239690 KLHL18O94889 574 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 CDRT1O95170 752 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 MATN4O95460 622 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 CLDN9O95484 217 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 S100A6P06703 90 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 AGXTP21549 392 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 OR1G1P47890 313 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 TMEM132BQ14DG7 1078 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 SYPL2Q5VXT5 272 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 LINC00299Q6ZSB3 139 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 USP45Q70EL2 814 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 TMEM192Q8IY95 271 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 LGI4Q8N135 537 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 ARFGAP1Q8N6T3 406 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 ADAMTS16Q8TE57 1224 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 EEF1AKMT1Q8WVE0 214 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 CDK15Q96Q40 435 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 NEURL2Q9BR09 285 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 MARCH2Q9P0N8 246 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 LSM7Q9UK45 103 aaKnown RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 NCKAP1Q9Y2A7 1128 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 PCDHB1Q9Y5F3 818 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 SPIN1Q9Y657 262 aaPredicted RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 NUMBLQ9Y6R0 609 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 GOLGA4Q13439 2230 aaKnown RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 ZCWPW2A0A1B0GU75 182 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 INMT-MINDY4F8WBC2 141 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 BMP4P12644 408 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 RCVRNP35243 200 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 MAZP56270 477 aaKnown RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 MBTD1Q05BQ5 628 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 GALNT2Q10471 571 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 CDK5R2Q13319 367 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 CAMK2GQ13555 558 aaPredicted RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 UNC50Q53HI1 259 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 CYBRD1Q53TN4 286 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 SIAH1Q8IUQ4 282 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 RBFAQ8N0V3 343 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 KLHL6Q8WZ60 621 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 C11orf16Q9NQ32 467 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 MCUBQ9NWR8 336 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 SEC14L4Q9UDX3 406 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 SIX4Q9UIU6 781 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 DNAJC15Q9Y5T4 150 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 YJEFN3A6XGL0 299 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 NT5C1B-RDH14C9J2C7 533 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 KIAA0513O60268 411 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 GADD45GO95257 159 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 MAP2K3P46734 347 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 INCA1Q0VD86 236 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 ST3GAL4Q11206 333 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 DPY19L1Q2PZI1 675 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 SPANXN4Q5MJ08 99 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 C10orf62Q5T681 223 aaPredicted RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 DEF8Q6ZN54 512 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 CADM2Q8N3J6 435 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 Q8N9G6 341 aaPredicted RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 CHDHQ8NE62 594 aaPredicted RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 BRSK1Q8TDC3 778 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 DEDD2Q8WXF8 326 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 ARNTL2Q8WYA1 636 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 COPS5Q92905 334 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 MED30Q96HR3 178 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 TXNDC15Q96J42 360 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 EXOC2Q96KP1 924 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 NFKBIZQ9BYH8 718 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 RBM38Q9H0Z9 239 aaKnown RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 GPN1Q9HCN4 374 aaPredicted RBP9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 COMMD9Q9P000 198 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 ATPIF1Q9UII2 106 aa9.35□□□□□ -0.91
NUDCD1-201ENST00000239690 RGPD2P0DJD1 1756 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 CLIC1O00299 241 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 WNT10BO00744 389 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 SEC14L2O76054 403 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 GADD45AP24522 165 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 GGT5P36269 586 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 PSMD4P55036 377 aaKnown RBP9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 RPP38P78345 283 aaKnown RBP9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 HMGCS1Q01581 520 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 EMX1Q04741 257 aaPredicted RBP9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 SRSF11Q05519 484 aaKnown RBP9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 RAPSNQ13702 412 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 PIK3R6Q5UE93 754 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 SPRED1Q7Z699 444 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 CDK20Q8IZL9 346 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 TBC1D19Q8N5T2 526 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 GPR156Q8NFN8 814 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 OR4A15Q8NGL6 344 aa9.34□□□□□ -0.91
NUDCD1-201ENST00000239690 UFD1Q92890 307 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms