RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 RBM44Q6ZP01 1051 aaKnown RBP15.79■□□□□ 0.12
UBE3D-201ENST00000237186 FKBP9P1Q75LS8 142 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 MRPL43Q8N983 215 aaKnown RBP15.79■□□□□ 0.12
UBE3D-201ENST00000237186 LEMD2Q8NC56 503 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 ZFP28Q8NHY6 868 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 FRS2Q8WU20 508 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 TCF25Q9BQ70 676 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 HEPHQ9BQS7 1158 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 ACPTQ9BZG2 426 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 GRIP2Q9C0E4 1043 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 FAM83DQ9H4H8 585 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 RAD18Q9NS91 495 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 TUBA8Q9NY65 449 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-201ENST00000237186 MARK1Q9P0L2 795 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 SNX6Q9UNH7 406 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 DMTF1Q9Y222 760 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 DENND4CQ5VZ89 1909 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 SGTAO43765 313 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 RAP2AP10114 183 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 TCF3P15923 654 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 RECQLP46063 649 aaPredicted RBP15.78■□□□□ 0.12
UBE3D-201ENST00000237186 HNRNPFP52597 415 aaKnown RBP15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ZNF33BQ06732 778 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 KCNC3Q14003 757 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 TEAD2Q15562 447 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ARHGAP15Q53QZ3 475 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 SPANXN4Q5MJ08 99 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ISLR2Q6UXK2 745 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 OTOP2Q7RTS6 562 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 MSRB3Q8IXL7 192 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 FAM47BQ8NA70 645 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ADAMTS16Q8TE57 1224 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 OTUB2Q96DC9 234 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 TMEM106CQ9BVX2 250 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 LINC00597Q9H2U6 94 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ZNHIT2Q9UHR6 403 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 MAN2B2Q9Y2E5 1009 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 TMED5Q9Y3A6 229 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 CFAP99D6REC4 459 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 CLOCKO15516 846 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ERN1O75460 977 aaKnown RBP15.78■□□□□ 0.12
UBE3D-201ENST00000237186 PDYNP01213 254 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 CYP2A7P20853 494 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 NFKBIAP25963 317 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 MAP7Q14244 749 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ZNF77Q15935 545 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 CPSF6Q16630 551 aaKnown RBP eCLIP15.78■□□□□ 0.12
UBE3D-201ENST00000237186 PTCHD3Q3KNS1 767 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 SGO1Q5FBB7 561 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 LRIF1Q5T3J3 769 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 TMEM215Q68D42 235 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 NEK5Q6P3R8 708 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 VRK3Q8IV63 474 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ZNF548Q8NEK5 533 aaPredicted RBP15.78■□□□□ 0.12
UBE3D-201ENST00000237186 OR2T12Q8NG77 320 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 MCOLN3Q8TDD5 553 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 HCAR2Q8TDS4 363 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 TIFAQ96CG3 184 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 MRGPRX3Q96LB0 322 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 HHIPQ96QV1 700 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 OSBPL6Q9BZF3 934 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ABCG8Q9H221 673 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 PIF1Q9H611 641 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 CAAP1Q9H8G2 361 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ZFP14Q9HCL3 533 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 IL23AQ9NPF7 189 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 PTTG2Q9NZH5 202 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 ERVW-1Q9UQF0 538 aa15.78■□□□□ 0.12
UBE3D-201ENST00000237186 A0A1B0GTW7 788 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 EI24O14681 340 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 AREL1O15033 823 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 GMNNO75496 209 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 SLCO2B1O94956 709 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 RPS14P62263 151 aaKnown RBP15.77■□□□□ 0.11
UBE3D-201ENST00000237186 CYP4F3Q08477 520 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 TRAM1L1Q8N609 369 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 KRTCAP2Q8N6L1 136 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 DDHD1Q8NEL9 900 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 ITFG1Q8TB96 612 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 ASZ1Q8WWH4 475 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 SELENOMQ8WWX9 145 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 POP5Q969H6 163 aaKnown RBP15.77■□□□□ 0.11
UBE3D-201ENST00000237186 CMTM7Q96FZ5 175 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 LRIG1Q96JA1 1093 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 RNF145Q96MT1 663 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 SEPHS2Q99611 448 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 P2RY13Q9BPV8 354 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 UGT2B28Q9BY64 529 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 KCNH6Q9H252 994 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 NTN4Q9HB63 628 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 SMPD3Q9NY59 655 aaPredicted RBP15.77■□□□□ 0.11
UBE3D-201ENST00000237186 SLC25A37Q9NYZ2 338 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 THEGQ9P2T0 379 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 INSL6Q9Y581 213 aa15.77■□□□□ 0.11
UBE3D-201ENST00000237186 HIDE1A8MVS5 230 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 UPK1AO00322 258 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 QSOX1O00391 747 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 DEAF1O75398 565 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 BMP10O95393 424 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 TIMP2P16035 220 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms