RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SLC47A1Q96FL8 570 aa8.94□□□□□ -0.98
SYDE2-201ENST00000234668 PPP3R2Q96LZ3 170 aa8.94□□□□□ -0.98
SYDE2-201ENST00000234668 MTERF1Q99551 399 aaKnown RBP8.94□□□□□ -0.98
SYDE2-201ENST00000234668 DPH2Q9BQC3 489 aaPredicted RBP8.94□□□□□ -0.98
SYDE2-201ENST00000234668 FBXO10Q9UK96 956 aa8.94□□□□□ -0.98
SYDE2-201ENST00000234668 OARD1Q9Y530 152 aa8.94□□□□□ -0.98
SYDE2-201ENST00000234668 ST14Q9Y5Y6 855 aa8.94□□□□□ -0.98
SYDE2-201ENST00000234668 DGKBQ9Y6T7 804 aa8.94□□□□□ -0.98
SYDE2-201ENST00000234668 ELOVL7A1L3X0 281 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 WDR47O94967 919 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PRSS23O95084 383 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 CPSF4O95639 269 aaKnown RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 ALPLP05186 524 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 RAP2AP10114 183 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 FCGR1AP12314 374 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PSMD7P51665 324 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PTSQ03393 145 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 SMARCB1Q12824 385 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 ABRQ12979 859 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 DCTN2Q13561 401 aaKnown RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PON2Q15165 354 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PTCHD3Q3KNS1 767 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 RETSATQ6NUM9 610 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 NEK5Q6P3R8 708 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 BORAQ6PGQ7 559 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 UBE2R2Q712K3 238 aaPredicted RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 ZNF551Q7Z340 670 aaPredicted RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 NXPE1Q8N323 547 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 DPP10Q8N608 796 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PACRGLQ8N7B6 248 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 HJURPQ8NCD3 748 aaPredicted RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 TSPEARQ8WU66 669 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 UBE2FQ969M7 185 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 C2orf49Q9BVC5 232 aaPredicted RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 HCFC1R1Q9NWW0 138 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 VNN3Q9NY84 501 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 WARS2Q9UGM6 360 aaKnown RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 MAGEL2Q9UJ55 1249 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 ERVK-11Q9UQG0 969 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PCDHB1Q9Y5F3 818 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 ANKRD33BA6NCL7 494 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 TMEM202A6NGA9 273 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 MYO1GB0I1T2 1018 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 hCG_2039718K7EN88 272 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 IFRD1O00458 451 aaPredicted RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 TEX28O15482 410 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 AQP1P29972 269 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 HALP42357 657 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 TUBA4AP68366 448 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 DEFB103AP81534 67 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 GRIK2Q13002 908 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 KCNAB2Q13303 367 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 CDKN3Q16667 212 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 CTU2Q2VPK5 515 aaKnown RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 KCTD21Q4G0X4 260 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 CACHD1Q5VU97 1274 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 CES5AQ6NT32 575 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 ELMSAN1Q6PJG2 1045 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 DOK6Q6PKX4 331 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 CERS6Q6ZMG9 384 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 DPY19L3Q6ZPD9 716 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 Q6ZVU0 165 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PDPRQ8NCN5 879 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PAPD5Q8NDF8 572 aaKnown RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 ZNF548Q8NEK5 533 aaPredicted RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 OR7A2PQ8NGA2 310 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 CNIH3Q8TBE1 160 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 FAM81AQ8TBF8 368 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 C2orf15Q8WU43 125 aaKnown RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 FAM120BQ96EK7 910 aaKnown RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 P2RY13Q9BPV8 354 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 RHNO1Q9BSD3 238 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 MRPL9Q9BYD2 267 aaKnown RBP8.93□□□□□ -0.98
SYDE2-201ENST00000234668 ELOVL6Q9H5J4 265 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PRDM8Q9NQV8 689 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 TMPRSS11EQ9UL52 423 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PPT2Q9UMR5 302 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 PHF24Q9UPV7 400 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 SH3BP1Q9Y3L3 701 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 INSL5Q9Y5Q6 135 aa8.93□□□□□ -0.98
SYDE2-201ENST00000234668 CREG1O75629 220 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 FTH1P02794 183 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 UMPSP11172 480 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 ALDH4A1P30038 563 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 HLA-FP30511 346 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 SPAM1P38567 509 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 EPHB3P54753 998 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 PLEKHG6Q3KR16 790 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 CCSMST1Q4G0I0 132 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 VTCN1Q7Z7D3 282 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 TMEM25Q86YD3 366 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 DCAF4L2Q8NA75 395 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 TNIP2Q8NFZ5 429 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 RNF217Q8TC41 542 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 SDCCAG3Q96C92 435 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 LHPPQ9H008 270 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 ATP13A3Q9H7F0 1226 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 IL21Q9HBE4 155 aa8.92□□□□□ -0.98
SYDE2-201ENST00000234668 EYSQ5T1H1 3165 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms