RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PARP15Q460N3 678 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 RFTN2Q52LD8 501 aaPredicted RBP9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 GPRIN3Q6ZVF9 776 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 TUBA1AQ71U36 451 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 HID1Q8IV36 788 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 C8orf59Q8N0T1 100 aaPredicted RBP9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 EFHBQ8N7U6 833 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 TP53I13Q8NBR0 393 aaPredicted RBP9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 LEMD2Q8NC56 503 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 S100ZQ8WXG8 99 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 EMILIN2Q9BXX0 1053 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 LRRC3Q9BY71 257 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 ASPSCR1Q9BZE9 553 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 C14orf119Q9NWQ9 140 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 PCDHB8Q9UN66 801 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 SNX8Q9Y5X2 465 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 NUP214P35658 2090 aaPredicted RBP9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 TMEM88BA6NKF7 163 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 TBC1D4O60343 1298 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 VPS4BO75351 444 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 EPOP01588 193 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 ABCB1P08183 1280 aaPredicted RBP9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 PTGS2P35354 604 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 HTR2BP41595 481 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 RPS24P62847 133 aaKnown RBP9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 ILF2Q12905 390 aaKnown RBP9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 PRKG2Q13237 762 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 IL27RAQ6UWB1 636 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 RTN4RL1Q86UN2 441 aaPredicted RBP9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZFAND4Q86XD8 727 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 GPSM1Q86YR5 675 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 LPCAT1Q8NF37 534 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 METTL6Q8TCB7 284 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 CD200R1Q8TD46 325 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 MAP6Q96JE9 813 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 FBXO44Q9H4M3 255 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 IKZF5Q9H5V7 419 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 NEUROG3Q9Y4Z2 214 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 DENND4AQ7Z401 1863 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 FAM234BA2RU67 622 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 TBKBP1A7MCY6 615 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 H3BUI4 141 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 TSPAN4O14817 238 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 KMOO15229 486 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 RGS5O15539 181 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 DFNA5O60443 496 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 UMPSP11172 480 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 AKR1A1P14550 325 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 PKMP14618 531 aaKnown RBP9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 TGM1P22735 817 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 CD40LGP29965 261 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 MC4RP32245 332 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 CASP3P42574 277 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 SNRPD2P62316 118 aaKnown RBP9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 PTGR1Q14914 329 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 ATP6AP1LQ52LC2 224 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 XAF1Q6GPH4 301 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 ENPP6Q6UWR7 440 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 PDPRQ8NCN5 879 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 OR56A4Q8NGH8 313 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 FBXO30Q8TB52 745 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 TSPEARQ8WU66 669 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZHX1-C8orf76Q96EF9 292 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 CEP19Q96LK0 163 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 BDH2Q9BUT1 245 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 VAPAQ9P0L0 249 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZMYM5Q9UJ78 669 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 B3GNT3Q9Y2A9 372 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 Q9Y3F1 56 aa9.21□□□□□ -0.94
HLA-DOA-201ENST00000229829 HS6ST1O60243 411 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 KLK8O60259 260 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 DUSP11O75319 330 aaKnown RBP9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 ALPLP05186 524 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 C7P10643 843 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 TACR2P21452 398 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 CTGFP29279 349 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 OR2B6P58173 313 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 UBE3AQ05086 875 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 ABRAXAS2Q15018 415 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 PON2Q15165 354 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 TAB1Q15750 504 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 AASDHQ4L235 1098 aaPredicted RBP9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZRANB3Q5FWF4 1079 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 VARS2Q5ST30 1063 aaKnown RBP9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 SPESP1Q6UW49 350 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZNF598Q86UK7 904 aaKnown RBP9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 FAM126BQ8IXS8 530 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 ITFG1Q8TB96 612 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 GIPC2Q8TF65 315 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 SLC22A17Q8WUG5 538 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 PEX13Q92968 403 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 ARMC5Q96C12 935 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 POLR3HQ9Y535 204 aaPredicted RBP9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 PCDHB3Q9Y5E6 796 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 MKI67P46013 3256 aaKnown RBP9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 STX16O14662 325 aa9.2□□□□□ -0.94
HLA-DOA-201ENST00000229829 AXIN1O15169 862 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms