RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 PRSS36Q5K4E3 855 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 UTS2BQ765I0 119 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 CLDN19Q8N6F1 224 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 Q8N9G6 341 aaPredicted RBP12.13□□□□□ -0.47
NUP88-201ENST00000225696 FBXO32Q969P5 355 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 ZNF566Q969W8 418 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 LGALS12Q96DT0 336 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 REXO5Q96IC2 774 aaKnown RBP12.13□□□□□ -0.47
NUP88-201ENST00000225696 PSKH2Q96QS6 385 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 APOL5Q9BWW9 433 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 CLMPQ9H6B4 373 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 TMEM45AQ9NWC5 275 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 HECAQ9UBI9 543 aaPredicted RBP12.13□□□□□ -0.47
NUP88-201ENST00000225696 VPS4AQ9UN37 437 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 DLGAP4Q9Y2H0 992 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 COMMD10Q9Y6G5 202 aa12.13□□□□□ -0.47
NUP88-201ENST00000225696 A0A0U1RQF3 1178 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 hCG_2039718K7EN88 272 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 IGLV3-27P01718 113 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 RETP07949 1114 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 MSH3P20585 1137 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 TACR1P25103 407 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 PTPN6P29350 595 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 TGFBR2P37173 567 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 TTPAP49638 278 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ARPP19P56211 112 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 YBEYP58557 167 aaPredicted RBP12.12□□□□□ -0.47
NUP88-201ENST00000225696 MVKQ03426 396 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ACOX1Q15067 660 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 DGUOKQ16854 277 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 SYT16Q17RD7 645 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 SYT6Q5T7P8 510 aaPredicted RBP12.12□□□□□ -0.47
NUP88-201ENST00000225696 LINGO4Q6UY18 593 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 LRRC8DQ7L1W4 858 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 CALHM3Q86XJ0 350 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ZDHHC21Q8IVQ6 265 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 AADATQ8N5Z0 425 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 GIPC2Q8TF65 315 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 PYURFQ96I23 114 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 CINPQ9BW66 212 aaPredicted RBP12.12□□□□□ -0.47
NUP88-201ENST00000225696 P2RY12Q9H244 342 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ZBTB20Q9HC78 741 aaPredicted RBP12.12□□□□□ -0.47
NUP88-201ENST00000225696 MAGEE1Q9HCI5 957 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ACOT13Q9NPJ3 140 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 NECTIN3Q9NQS3 549 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 SIRT5Q9NXA8 310 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 NUDT4Q9NZJ9 180 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ZNF490Q9ULM2 529 aaPredicted RBP12.12□□□□□ -0.47
NUP88-201ENST00000225696 PRG3Q9Y2Y8 225 aaPredicted RBP12.12□□□□□ -0.47
NUP88-201ENST00000225696 RAI2Q9Y5P3 530 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ZFP37Q9Y6Q3 630 aaPredicted RBP12.12□□□□□ -0.47
NUP88-201ENST00000225696 TRPM7Q96QT4 1865 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 MYO1GB0I1T2 1018 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ANKRD66B4E2M5 251 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ZNF623O75123 536 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 SEC24AO95486 1093 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ZNF682O95780 498 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 OTCP00480 354 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 F11P03951 625 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 BCKDHAP12694 445 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 SPNP16150 400 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 JUNDP17535 347 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 CD40LGP29965 261 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 THPOP40225 353 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 SEPHS1P49903 392 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 FCGRTP55899 365 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 MGAT3Q09327 533 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 SF3B4Q15427 424 aaKnown RBP eCLIP12.12□□□□□ -0.471e-7■■■■□ 22.4
NUP88-201ENST00000225696 FAM110CQ1W6H9 321 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 MORN1Q5T089 497 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 VTCN1Q7Z7D3 282 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ZNF540Q8NDQ6 660 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 S100ZQ8WXG8 99 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 STARD8Q92502 1023 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 PPP3R2Q96LZ3 170 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ZBTB18Q99592 522 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 CPPED1Q9BRF8 314 aaPredicted RBP12.12□□□□□ -0.47
NUP88-201ENST00000225696 CIPCQ9C0C6 399 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 DSN1Q9H410 356 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 FBXO44Q9H4M3 255 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ABCB10Q9NRK6 738 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 ANKMY1Q9P2S6 941 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 EIF3LQ9Y262 564 aaKnown RBP12.12□□□□□ -0.47
NUP88-201ENST00000225696 PRSS21Q9Y6M0 314 aa12.12□□□□□ -0.47
NUP88-201ENST00000225696 CHD5Q8TDI0 1954 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 UPK3BL1B0FP48 263 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 LOC730098B7Z3J9 87 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 UPK3BL2E5RIL1 263 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 H3BNC9 293 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 IFRD1O00458 451 aaPredicted RBP12.11□□□□□ -0.47
NUP88-201ENST00000225696 STX7O15400 261 aaKnown RBP12.11□□□□□ -0.47
NUP88-201ENST00000225696 DNAJB5O75953 348 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 ITGAMP11215 1152 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 TYMPP19971 482 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 KRT20P35900 424 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 GSSP48637 474 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 MAPKAPK2P49137 400 aa12.11□□□□□ -0.47
NUP88-201ENST00000225696 ILF2Q12905 390 aaKnown RBP12.11□□□□□ -0.47
NUP88-201ENST00000225696 MAP2K5Q13163 448 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms