RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CHRM5P08912 532 aaPredicted RBP12.28□□□□□ -0.44
LSM5-201ENST00000223084 EBLN1P0CF75 366 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 PVRP15151 417 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 FOLR1P15328 257 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 UGT2B7P16662 529 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 PKLRP30613 574 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 CDKN2DP55273 166 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 CAV1Q03135 178 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 MGAT5Q09328 741 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 SRSF6Q13247 344 aaKnown RBP12.28□□□□□ -0.44
LSM5-201ENST00000223084 CLN3Q13286 438 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 FRG1Q14331 258 aaKnown RBP12.28□□□□□ -0.44
LSM5-201ENST00000223084 DCAF12Q5T6F0 453 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 KIAA0408Q6ZU52 694 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 TAX1BP1Q86VP1 789 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 FAM20CQ8IXL6 584 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 PALM2Q8IXS6 379 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 CPNE9Q8IYJ1 553 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 MNS1Q8NEH6 495 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 GABPB2Q8TAK5 448 aaPredicted RBP12.28□□□□□ -0.44
LSM5-201ENST00000223084 UBXN4Q92575 508 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 KCNJ9Q92806 393 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 INPP5DQ92835 1189 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 CRELD1Q96HD1 420 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 FOPNLQ96NB1 174 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 OR2A14Q96R47 310 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 OR6C1Q96RD1 312 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 MENTQ9BUN1 341 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 DDA1Q9BW61 102 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 FBXO8Q9NRD0 319 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 SMYD2Q9NRG4 433 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 MOCS1Q9NZB8 636 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 DMGDHQ9UI17 866 aaKnown RBP12.28□□□□□ -0.44
LSM5-201ENST00000223084 DHRS7Q9Y394 339 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 PCDHGA3Q9Y5H0 932 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 COMMD10Q9Y6G5 202 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 DSPP15924 2871 aaKnown RBP12.28□□□□□ -0.44
LSM5-201ENST00000223084 ARHGEF33A8MVX0 844 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 C2orf74A8MZ97 194 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 POLR1CO15160 346 aaPredicted RBP12.27□□□□□ -0.45
LSM5-201ENST00000223084 VPS26AO75436 327 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 MATN4O95460 622 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 RPN2P04844 631 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 ST6GAL1P15907 406 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 MCM3P25205 808 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 ATP5DP30049 168 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 PEBP1P30086 187 aaKnown RBP12.27□□□□□ -0.45
LSM5-201ENST00000223084 ARL4DP49703 201 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 RAB15P59190 212 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 GPX6P59796 221 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 TLE3Q04726 772 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 SPESP1Q6UW49 350 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 CEACAM20Q6UY09 585 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 CYHR1Q6ZMK1 362 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 D2HGDHQ8N465 521 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 GPATCH11Q8N954 259 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 LINC01555Q8NAE3 123 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 FLVCR1-AS1Q8TAF5 88 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 B3GNT4Q9C0J1 378 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 C1GALT1Q9NS00 363 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 ZDHHC18Q9NUE0 388 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 SOHLH2Q9NX45 425 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 OR6C2Q9NZP2 312 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 ZFATQ9P243 1243 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 ACSL6Q9UKU0 697 aa12.27□□□□□ -0.45
LSM5-201ENST00000223084 CXorf49A8MYA2 514 aaPredicted RBP12.26□□□□□ -0.45
LSM5-201ENST00000223084 ISM1B1AKI9 464 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 MATN2O00339 956 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 RASGRF2O14827 1237 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 KDM1AO60341 852 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 ZBTB11O95625 1053 aaPredicted RBP12.26□□□□□ -0.45
LSM5-201ENST00000223084 ZNF28P17035 718 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 MAGEA4P43358 317 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 RAB28P51157 221 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 HSD11B2P80365 405 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 TUBB3Q13509 450 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 GPR19Q15760 415 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 COL28A1Q2UY09 1125 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 TTLL9Q3SXZ7 439 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.26□□□□□ -0.45
LSM5-201ENST00000223084 HECTD2Q5U5R9 776 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 TTC23LQ6PF05 361 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 PAQR3Q6TCH7 311 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 C3orf62Q6ZUJ4 267 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 PIWIL4Q7Z3Z4 852 aaKnown RBP12.26□□□□□ -0.45
LSM5-201ENST00000223084 STRA8Q7Z7C7 330 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 GALNT7Q86SF2 657 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 KMT5CQ86Y97 462 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 DENND1AQ8TEH3 1009 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 SEC14L1Q92503 715 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 RAD51AP1Q96B01 352 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 TRAPPC9Q96Q05 1148 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 OLFM1Q99784 485 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 PITPNM3Q9BZ71 974 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 ASPSCR1Q9BZE9 553 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 TWSG1Q9GZX9 223 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 KLHL42Q9P2K6 505 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 TRMT6Q9UJA5 497 aaKnown RBP12.26□□□□□ -0.45
LSM5-201ENST00000223084 SLC39A10Q9ULF5 831 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 KLHL20Q9Y2M5 609 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms