RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 MBTPS1Q14703 1052 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 PPP4R4Q6NUP7 873 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 SERPINA13PQ6UXR4 307 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 RD3Q7Z3Z2 195 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 LIMS2Q7Z4I7 341 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 RIOK2Q9BVS4 552 aaKnown RBP13.28□□□□□ -0.28
RAB3D-201ENST00000222120 OSBPL6Q9BZF3 934 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 SLC32A1Q9H598 525 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 TESMINQ9Y4I5 508 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 TARM1B6A8C7 271 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 J3QRK9 145 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 PRAMEF12O95522 483 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 FGF4P08620 206 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 ENO2P09104 434 aaPredicted RBP13.28□□□□□ -0.28
RAB3D-201ENST00000222120 GSTM1P09488 218 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 MTHFD2P13995 350 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 BPIP17213 487 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 CD70P32970 193 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 S100A5P33763 92 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 ST13P50502 369 aaKnown RBP13.28□□□□□ -0.28
RAB3D-201ENST00000222120 ARF5P84085 180 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 IRF5Q13568 498 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 ATP13A5Q4VNC0 1218 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 GPRC6AQ5T6X5 926 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 INTS11Q5TA45 600 aaKnown RBP13.28□□□□□ -0.28
RAB3D-201ENST00000222120 GALNT18Q6P9A2 607 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 FBXL8Q96CD0 374 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 RPF2Q9H7B2 306 aaKnown RBP13.28□□□□□ -0.28
RAB3D-201ENST00000222120 TIMMDC1Q9NPL8 285 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 ZDHHC3Q9NYG2 299 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 USE1Q9NZ43 259 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 PDE10AQ9Y233 779 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 MAP4K5Q9Y4K4 846 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 H3BNH8 94 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 KPNA5O15131 536 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 TULP3O75386 442 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 ARSFP54793 590 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 HKDC1Q2TB90 917 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 CROCCP3Q8IVE0 287 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 CASD1Q96PB1 797 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 RBM4BQ9BQ04 359 aaKnown RBP13.28□□□□□ -0.28
RAB3D-201ENST00000222120 RBM4Q9BWF3 364 aaKnown RBP13.28□□□□□ -0.28
RAB3D-201ENST00000222120 TOR3AQ9H497 397 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 RPS6KA6Q9UK32 745 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 CEP290O15078 2479 aa13.28□□□□□ -0.28
RAB3D-201ENST00000222120 PER2O15055 1255 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 SUV39H1O43463 412 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 RFC2P35250 354 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 GRIA2P42262 883 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 STT3AP46977 705 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 CCDC85BQ15834 202 aaPredicted RBP13.27□□□□□ -0.28
RAB3D-201ENST00000222120 NCEH1Q6PIU2 408 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 ENPP6Q6UWR7 440 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 AHSA2Q719I0 299 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 PRICKLE1Q96MT3 831 aaPredicted RBP13.27□□□□□ -0.28
RAB3D-201ENST00000222120 MUC13Q9H3R2 512 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 ZDHHC4Q9NPG8 344 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 TMCC3Q9ULS5 477 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 WNT6Q9Y6F9 365 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 LAG3P18627 525 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 EPS8Q12929 822 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 TRIM60Q495X7 471 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 GPR33Q49SQ1 333 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 TPGS2Q68CL5 300 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 TPRG1Q6ZUI0 275 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 OR4A15Q8NGL6 344 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 WBP2Q969T9 261 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 TMEM125Q96AQ2 219 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 SCHIP1Q9P0W5 487 aaPredicted RBP13.27□□□□□ -0.28
RAB3D-201ENST00000222120 DNAJB9Q9UBS3 223 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 EBF1Q9UH73 591 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 ASB1Q9Y576 335 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 GPR45Q9Y5Y3 372 aa13.27□□□□□ -0.28
RAB3D-201ENST00000222120 F5P12259 2224 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 CLIC1O00299 241 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 DBTP11182 482 aaKnown RBP13.27□□□□□ -0.29
RAB3D-201ENST00000222120 ENTPD1P49961 510 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 PSMD7P51665 324 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 HTRA3P83110 453 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 LSAMPQ13449 338 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 SF1Q15637 639 aaKnown RBP13.27□□□□□ -0.29
RAB3D-201ENST00000222120 GPR153Q6NV75 609 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 DTWD1Q8N5C7 304 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 TMEM102Q8N9M5 508 aaPredicted RBP13.27□□□□□ -0.29
RAB3D-201ENST00000222120 ATL1Q8WXF7 558 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 DACT3Q96B18 629 aaPredicted RBP13.27□□□□□ -0.29
RAB3D-201ENST00000222120 NODALQ96S42 347 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 MAGEE1Q9HCI5 957 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 SELENONQ9NZV5 590 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 VAPAQ9P0L0 249 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 IKZF3Q9UKT9 509 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 OAS3Q9Y6K5 1087 aaKnown RBP13.27□□□□□ -0.29
RAB3D-201ENST00000222120 PRSS21Q9Y6M0 314 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 H0Y858 1186 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 CREG1O75629 220 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 SCELO95171 688 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 TGFB1P01137 390 aa13.27□□□□□ -0.29
RAB3D-201ENST00000222120 PABPC1P11940 636 aaKnown RBP13.27□□□□□ -0.29
RAB3D-201ENST00000222120 BCKDHAP12694 445 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms