RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RAD9AQ99638 391 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 TRPS1Q9UHF7 1281 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 V9GYQ6 96 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 A8MX80 341 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 CPNE6O95741 557 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 ALBP02768 609 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 BMPR1AP36894 532 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 ARSFP54793 590 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 TEAD2Q15562 447 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 ASTLQ6HA08 431 aaPredicted RBP21.7■■□□□ 1.06
CCDC9-201ENST00000221922 CCDC115Q96NT0 180 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 COPS8Q99627 209 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 NTMT1Q9BV86 223 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 CXXC1Q9P0U4 656 aaPredicted RBP21.7■■□□□ 1.06
CCDC9-201ENST00000221922 IFT80Q9P2H3 777 aaPredicted RBP21.7■■□□□ 1.06
CCDC9-201ENST00000221922 ZMYM5Q9UJ78 669 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 EIF3LQ9Y262 564 aaKnown RBP21.7■■□□□ 1.06
CCDC9-201ENST00000221922 POLR3HQ9Y535 204 aaPredicted RBP21.7■■□□□ 1.06
CCDC9-201ENST00000221922 DOCK6Q96HP0 2047 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 A0A1W2PQ67 120 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 ANXA6P08133 673 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 EBLN1P0CF75 366 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 CTNNB1P35222 781 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 ENTPD1P49961 510 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 MTPNP58546 118 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 GRSF1Q12849 480 aaKnown RBP eCLIP21.69■■□□□ 1.06
CCDC9-201ENST00000221922 KIAA0040Q15053 153 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 PLCL1Q15111 1095 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 GPR107Q5VW38 600 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 ZNF641Q96N77 438 aaPredicted RBP21.69■■□□□ 1.06
CCDC9-201ENST00000221922 ZBTB18Q99592 522 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 TDP1Q9NUW8 608 aa21.69■■□□□ 1.06
CCDC9-201ENST00000221922 FAF1Q9UNN5 650 aaPredicted RBP21.69■■□□□ 1.06
CCDC9-201ENST00000221922 hCG_2014768A0A024R1R8 64 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 SH3PXD2BA1X283 911 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 POP4O95707 220 aaKnown RBP21.68■■□□□ 1.06
CCDC9-201ENST00000221922 ALPLP05186 524 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 PABPC1P11940 636 aaKnown RBP21.68■■□□□ 1.06
CCDC9-201ENST00000221922 EPB42P16452 691 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 DAG1Q14118 895 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 FAM98BQ52LJ0 330 aaKnown RBP21.68■■□□□ 1.06
CCDC9-201ENST00000221922 CARD16Q5EG05 197 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 HABP4Q5JVS0 413 aaKnown RBP21.68■■□□□ 1.06
CCDC9-201ENST00000221922 ELMSAN1Q6PJG2 1045 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 ITFG1Q8TB96 612 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 ZNF583Q96ND8 569 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 DCUN1D5Q9BTE7 237 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 GORASP2Q9H8Y8 452 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 TMEM9Q9P0T7 183 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 CCL27Q9Y4X3 112 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 NEDD8-MDP1E9PL57 170 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 RFPL2O75678 378 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 RSL1D1O76021 490 aaKnown RBP21.68■■□□□ 1.06
CCDC9-201ENST00000221922 ANXA5P08758 320 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 JUNBP17275 347 aaPredicted RBP21.68■■□□□ 1.06
CCDC9-201ENST00000221922 HOXA9P31269 272 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 DGKQP52824 942 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 DMC1Q14565 340 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 OTUD3Q5T2D3 398 aaPredicted RBP21.68■■□□□ 1.06
CCDC9-201ENST00000221922 TMEM214Q6NUQ4 689 aaKnown RBP21.68■■□□□ 1.06
CCDC9-201ENST00000221922 ZNF773Q6PK81 442 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 IRF7Q92985 503 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 TMBIM1Q969X1 311 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 MUS81Q96NY9 551 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 HBEGFQ99075 208 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 BBS2Q9BXC9 721 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 SLC29A3Q9BZD2 475 aa21.68■■□□□ 1.06
CCDC9-201ENST00000221922 KIAA0100Q14667 2235 aaKnown RBP21.67■■□□□ 1.06
CCDC9-201ENST00000221922 RHOP08100 348 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 SLC2A4P14672 509 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 FPGSQ05932 587 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 RFTN2Q52LD8 501 aaPredicted RBP21.67■■□□□ 1.06
CCDC9-201ENST00000221922 ADGRG2Q8IZP9 1017 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 POF1BQ8WVV4 589 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 PPP1R14BQ96C90 147 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 MYOFQ9NZM1 2061 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 BNIP3LO60238 219 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 ULK1O75385 1050 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 STK16O75716 305 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 HPRP00739 348 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 OR56A5P0C7T3 313 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 YAP1P46937 504 aaKnown RBP21.67■■□□□ 1.06
CCDC9-201ENST00000221922 RPL38P63173 70 aaKnown RBP21.67■■□□□ 1.06
CCDC9-201ENST00000221922 PTSQ03393 145 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 CHRNB3Q05901 458 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 TMEM26Q6ZUK4 368 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 TRIM46Q7Z4K8 759 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 OR13F1Q8NGS4 319 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 SPPL3Q8TCT6 385 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 HSPBAP1Q96EW2 488 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 ZDHHC6Q9H6R6 413 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 TBC1D14Q9P2M4 693 aa21.67■■□□□ 1.06
CCDC9-201ENST00000221922 IGLV3-16A0A075B6K0 115 aa21.66■■□□□ 1.06
CCDC9-201ENST00000221922 ARHGEF15O94989 841 aa21.66■■□□□ 1.06
CCDC9-201ENST00000221922 KCNH1O95259 989 aa21.66■■□□□ 1.06
CCDC9-201ENST00000221922 THRBP10828 461 aa21.66■■□□□ 1.06
CCDC9-201ENST00000221922 TCF3P15923 654 aa21.66■■□□□ 1.06
CCDC9-201ENST00000221922 POLR2IP36954 125 aaKnown RBP21.66■■□□□ 1.06
CCDC9-201ENST00000221922 GDF5P43026 501 aa21.66■■□□□ 1.06
CCDC9-201ENST00000221922 ZNF77Q15935 545 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms