RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SLC13A3Q8WWT9 602 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 KLHDC7BQ96G42 594 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 GPATCH1Q9BRR8 931 aaKnown RBP18.58■□□□□ 0.57
SMPD3-201ENST00000219334 GDAP2Q9NXN4 497 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 MTMR11A4FU01 709 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 C9JVG2 144 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 HAS3O00219 553 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 YAP1P46937 504 aaKnown RBP18.58■□□□□ 0.57
SMPD3-201ENST00000219334 XIAPP98170 497 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 DCTN2Q13561 401 aaKnown RBP18.58■□□□□ 0.57
SMPD3-201ENST00000219334 CXorf57Q6NSI4 855 aaKnown RBP18.58■□□□□ 0.57
SMPD3-201ENST00000219334 CROCCP3Q8IVE0 287 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 THUMPD1Q9NXG2 353 aaKnown RBP18.58■□□□□ 0.57
SMPD3-201ENST00000219334 HS3ST4Q9Y661 456 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF726A6NNF4 738 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 H0YGN5 161 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 FADS2O95864 444 aaKnown RBP18.58■□□□□ 0.56
SMPD3-201ENST00000219334 ARHGAP40Q5TG30 622 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 VWA5B1Q5TIE3 1220 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 TNFAIP8L2Q6P589 184 aaPredicted RBP18.58■□□□□ 0.56
SMPD3-201ENST00000219334 NATD1Q8N6N6 113 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 FAM47BQ8NA70 645 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 FAM110BQ8TC76 370 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 KIAA1143Q96AT1 154 aaPredicted RBP18.58■□□□□ 0.56
SMPD3-201ENST00000219334 COMMD4Q9H0A8 199 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 NIPSNAP2O75323 286 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 ADH1BP00325 375 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 RALGPS1Q5JS13 557 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 LY6G5CQ5SRR4 150 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 ZNF516Q92618 1163 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 PLEKHG4BQ96PX9 1271 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 RNF121Q9H920 327 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 CHMP1AQ9HD42 196 aaPredicted RBP18.58■□□□□ 0.56
SMPD3-201ENST00000219334 DHRS7Q9Y394 339 aa18.58■□□□□ 0.56
SMPD3-201ENST00000219334 A0A1W2PQ72 361 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 LEFTY2O00292 366 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.57■□□□□ 0.56
SMPD3-201ENST00000219334 DNAJB8Q8NHS0 232 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 S100ZQ8WXG8 99 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 PYCR2Q96C36 320 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 ROPN1LQ96C74 230 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 PCDHB3Q9Y5E6 796 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 KMOO15229 486 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 NDUFS4O43181 175 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 TULP3O75386 442 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 SERPINA3P01011 423 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 ACVRL1P37023 503 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 C22orf39Q6P5X5 142 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 PAOXQ6QHF9 649 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 TPRG1Q6ZUI0 275 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 SLC30A8Q8IWU4 369 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 HM13Q8TCT9 377 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 IFT27Q9BW83 186 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 ATXN10Q9UBB4 475 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 DGKBQ9Y6T7 804 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 PPEF2O14830 753 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 RENP00797 406 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 RLN1P04808 185 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 PTX3P26022 381 aaPredicted RBP18.57■□□□□ 0.56
SMPD3-201ENST00000219334 KCNJ5P48544 419 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 PAQR3Q6TCH7 311 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 THAP5Q7Z6K1 395 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 PIGKQ92643 395 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 TFGQ92734 400 aaPredicted RBP18.57■□□□□ 0.56
SMPD3-201ENST00000219334 CMTM7Q96FZ5 175 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 IGSF21Q96ID5 467 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 RNF186Q9NXI6 227 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 ZNF222Q9UK12 451 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 TESMINQ9Y4I5 508 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 RGS10O43665 173 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 DBIP07108 87 aaKnown RBP18.57■□□□□ 0.56
SMPD3-201ENST00000219334 NFKB2Q00653 900 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 RASGEF1BQ0VAM2 473 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 RGS21Q2M5E4 152 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 KCTD21Q4G0X4 260 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 SMARCD3Q6STE5 483 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 CLNKQ7Z7G1 428 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 ZZZ3Q8IYH5 903 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 ZNF781Q8N8C0 355 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 TP53INP1Q96A56 240 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 OTUB2Q96DC9 234 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 USP29Q9HBJ7 922 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 SERTAD3Q9UJW9 196 aa18.57■□□□□ 0.56
SMPD3-201ENST00000219334 OR51F1A6NGY5 319 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 PLOD3O60568 738 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 PRAMEF12O95522 483 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 TGFB1P01137 390 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 CD2P06729 351 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 CXCR1P25024 350 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 PSMA1P25786 263 aaKnown RBP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 GDF10P55107 478 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 TLR1Q15399 786 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 CCDC54Q8NEL0 328 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 FBXL18Q96ME1 805 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 SSU72Q9NP77 194 aaKnown RBP18.56■□□□□ 0.56
SMPD3-201ENST00000219334 VPS29Q9UBQ0 182 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 AGR2O95994 175 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 SIRPB2Q5JXA9 342 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 NAPRTQ6XQN6 538 aa18.56■□□□□ 0.56
SMPD3-201ENST00000219334 DCAF4L2Q8NA75 395 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms