RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TPBGLP0DKB5 382 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 GLB1P16278 677 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 RBM12BQ8IXT5 1001 aaKnown RBP26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 FBXO15Q8NCQ5 510 aaPredicted RBP26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 OR9A1PQ8NGU1 263 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 RHEBL1Q8TAI7 183 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 SLC38A3Q99624 504 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 MRPL57Q9BQC6 102 aaKnown RBP26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 MRPL46Q9H2W6 279 aaKnown RBP26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 EMCNQ9ULC0 261 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 GRID1Q9ULK0 1009 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 SUPT3HB4E1H0 165 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 MYO1CO00159 1063 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 SUPT3HO75486 399 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 LDOC1O95751 146 aaPredicted RBP26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 TGFBIQ15582 683 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 LMNTD1Q8N9Z9 388 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 LCN9Q8WX39 176 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 CCDC74AQ96AQ1 378 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 SH3KBP1Q96B97 665 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 EGFL8Q99944 293 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 TBC1D10AQ9BXI6 508 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 ICKQ9UPZ9 632 aa26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 UBXN8O00124 270 aa26.46■■□□□ 1.83
CHMP4B-201ENST00000217402 TYROBPO43914 113 aa26.46■■□□□ 1.83
CHMP4B-201ENST00000217402 CKMT1AP12532 417 aa26.46■■□□□ 1.83
CHMP4B-201ENST00000217402 TCP10LQ8TDR4 215 aa26.46■■□□□ 1.83
CHMP4B-201ENST00000217402 KCNK9Q9NPC2 374 aa26.46■■□□□ 1.83
CHMP4B-201ENST00000217402 CD274Q9NZQ7 290 aa26.46■■□□□ 1.83
CHMP4B-201ENST00000217402 GVINP1Q7Z2Y8 2422 aa26.46■■□□□ 1.83
CHMP4B-201ENST00000217402 GOLGA4Q13439 2230 aaKnown RBP26.46■■□□□ 1.83
CHMP4B-201ENST00000217402 SLC16A8O95907 504 aa26.45■■□□□ 1.82
CHMP4B-201ENST00000217402 AP1S2P56377 157 aa26.45■■□□□ 1.82
CHMP4B-201ENST00000217402 EFL1Q7Z2Z2 1120 aaKnown RBP26.45■■□□□ 1.82
CHMP4B-201ENST00000217402 OR4E2Q8NGC2 313 aa26.45■■□□□ 1.82
CHMP4B-201ENST00000217402 DENND1AQ8TEH3 1009 aa26.45■■□□□ 1.82
CHMP4B-201ENST00000217402 ZFPM2Q8WW38 1151 aa26.45■■□□□ 1.82
CHMP4B-201ENST00000217402 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.45■■□□□ 1.82
CHMP4B-201ENST00000217402 RDH14Q9HBH5 336 aa26.45■■□□□ 1.82
CHMP4B-201ENST00000217402 SLC17A7Q9P2U7 560 aa26.45■■□□□ 1.82
CHMP4B-201ENST00000217402 FAM186AA6NE01 2351 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 SYCE1LA8MT33 242 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 KDM1AO60341 852 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 ALDH4A1P30038 563 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 RPA3P35244 121 aaPredicted RBP26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 PPM1FP49593 454 aaPredicted RBP26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 C2orf73Q8N5S3 287 aaPredicted RBP26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 Q8N9G6 341 aaPredicted RBP26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 CCDC63Q8NA47 563 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 PKNOX2Q96KN3 472 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 CCDC138Q96M89 665 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 FAM111AQ96PZ2 611 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 MENTQ9BUN1 341 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 SSU72Q9NP77 194 aaKnown RBP26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 PLLPQ9Y342 182 aa26.44■■□□□ 1.82
CHMP4B-201ENST00000217402 EME2A4GXA9 379 aaPredicted RBP26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 HMGB1P1B2RPK0 211 aaPredicted RBP26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 PLIN3O60664 434 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 CBFA2T3O75081 653 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 PROCP04070 461 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 S100BP04271 92 aaPredicted RBP26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 SBK3P0C264 359 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 RAB28P51157 221 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 DUSP3P51452 185 aaPredicted RBP26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 PERM1Q5SV97 790 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 ZNF438Q7Z4V0 828 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 TMEM151AQ8N4L1 468 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 OR6C4Q8NGE1 309 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 BAHD1Q8TBE0 780 aaPredicted RBP26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 NAT6Q93015 286 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 SRMSQ9H3Y6 488 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 UCK1Q9HA47 277 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 EVA1BQ9NVM1 165 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 KCNK4Q9NYG8 393 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 NUDT4Q9NZJ9 180 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 STOX2Q9P2F5 926 aaPredicted RBP26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 CCDC189A1A4V9 331 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 LILRA5A6NI73 299 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 PKLRP30613 574 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 HPDP32754 393 aaPredicted RBP26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 SHMT2P34897 504 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 LIMK1P53667 647 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 OR1D5P58170 312 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 CCDC153Q494R4 210 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 TAX1BP1Q86VP1 789 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 AMIGO1Q86WK6 493 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 RAB42Q8N4Z0 105 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 PPFIBP2Q8ND30 876 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 IFI44Q8TCB0 444 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 ZNF480Q8WV37 535 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 SPATA7Q9P0W8 599 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 LNPEPQ9UIQ6 1025 aa26.43■■□□□ 1.82
CHMP4B-201ENST00000217402 ANXA5P08758 320 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 MTHFD2P13995 350 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 GFAPP14136 432 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 CKMT2P17540 419 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 TYRP1P17643 537 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 IMPA1P29218 277 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 CDKL1Q00532 357 aa26.42■■□□□ 1.82
CHMP4B-201ENST00000217402 HSP90B2PQ58FF3 399 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms