RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 FOXN2P32314 431 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 GDF10P55107 478 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 DCDP81605 110 aaKnown RBP18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 NR6A1Q15406 480 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 MRPL14Q6P1L8 145 aaKnown RBP18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 PPP1R32Q7Z5V6 425 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 TMTC1Q8IUR5 882 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 GALNT16Q8N428 558 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 LRRC57Q8N9N7 239 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 INPP5DQ92835 1189 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 CALR3Q96L12 384 aaKnown RBP18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 ZNF552Q9H707 407 aaPredicted RBP18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 ASF1BQ9NVP2 202 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 P4HTMQ9NXG6 502 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 POLG2Q9UHN1 485 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 SRPK3Q9UPE1 567 aa18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 REXO2Q9Y3B8 237 aaKnown RBP18.97■□□□□ 0.63
SYNGR1-201ENST00000216155 GRID2IPA4D2P6 1211 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 PEX12O00623 359 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 AP2A1O95782 977 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 ALPPP05187 535 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 UMODP07911 640 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 CETN2P41208 172 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 NAP1L1P55209 391 aaKnown RBP18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 SKOR2Q2VWA4 1001 aaPredicted RBP18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 SYTL3Q4VX76 610 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 TLDC1Q6P9B6 456 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 IGFL3Q6UXB1 125 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 DNAJC22Q8N4W6 341 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 AP1M1Q9BXS5 423 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 TXLNGQ9NUQ3 528 aa18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 ERRFI1Q9UJM3 462 aaPredicted RBP18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 EPN1Q9Y6I3 576 aaPredicted RBP18.96■□□□□ 0.63
SYNGR1-201ENST00000216155 CCDC162PA2VCL2 907 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 BTNL10A8MVZ5 291 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 CBX6O95503 412 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 SLC5A12Q1EHB4 618 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 P3H1Q32P28 736 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 NKAIN1Q4KMZ8 207 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 CCDC38Q502W7 563 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 FAM20CQ8IXL6 584 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 TAB3Q8N5C8 712 aaPredicted RBP18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 CISD2Q8N5K1 135 aaKnown RBP18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 TRIM5Q9C035 493 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 LACRTQ9GZZ8 138 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 SLC22A11Q9NSA0 550 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 IRAK4Q9NWZ3 460 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 PLCL2Q9UPR0 1127 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 ANKRD12Q6UB98 2062 aa18.95■□□□□ 0.62
SYNGR1-201ENST00000216155 ISM1B1AKI9 464 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 OR1I1O60431 355 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 CLDN1O95832 211 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 IGHEP01854 428 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 CD63P08962 238 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 PKLRP30613 574 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 GCGRP47871 477 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 KLF1Q13351 362 aaPredicted RBP18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 KIR2DS3Q14952 304 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 CRB2Q5IJ48 1285 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 LYPLAL1Q5VWZ2 237 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 TTC13Q8NBP0 860 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 OR13J1Q8NGT2 312 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 PTERQ96BW5 349 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 ALS2CR12Q96Q35 445 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 RANBP9Q96S59 729 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 TMEM121Q9BTD3 319 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 ILKAPQ9H0C8 392 aaPredicted RBP18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 ZBTB20Q9HC78 741 aaPredicted RBP18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 IMPACTQ9P2X3 320 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 R3HDM2Q9Y2K5 976 aaKnown RBP18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 MYO9AB2RTY4 2548 aa18.94■□□□□ 0.62
SYNGR1-201ENST00000216155 GOLGA6L9A6NEM1 432 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 WIPF3A6NGB9 483 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 IPO13O94829 963 aaKnown RBP18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 LDLRP01130 860 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 OR56A5P0C7T3 313 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 ITGAXP20702 1163 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 MAGP20916 626 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 SOX8P57073 446 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 PLOD1Q02809 727 aaPredicted RBP18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 CYP2A13Q16696 494 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 MAMDC2Q7Z304 686 aaPredicted RBP18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 LINC01555Q8NAE3 123 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 OR52K1Q8NGK4 314 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 SLC35B2Q8TB61 432 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 NDC1Q9BTX1 674 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 MENTQ9BUN1 341 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 EURLQ9NYK6 297 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 KLHL20Q9Y2M5 609 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 PCDHGA10Q9Y5H3 936 aa18.93■□□□□ 0.62
SYNGR1-201ENST00000216155 AGPSO00116 658 aa18.92■□□□□ 0.62
SYNGR1-201ENST00000216155 IPO7O95373 1038 aaKnown RBP18.92■□□□□ 0.62
SYNGR1-201ENST00000216155 COL8A1P27658 744 aa18.92■□□□□ 0.62
SYNGR1-201ENST00000216155 RAB28P51157 221 aa18.92■□□□□ 0.62
SYNGR1-201ENST00000216155 CSE1LP55060 971 aaKnown RBP18.92■□□□□ 0.62
SYNGR1-201ENST00000216155 ZNF787Q6DD87 383 aa18.92■□□□□ 0.62
SYNGR1-201ENST00000216155 RAD9BQ6WBX8 426 aa18.92■□□□□ 0.62
SYNGR1-201ENST00000216155 Q6ZS92 163 aa18.92■□□□□ 0.62
SYNGR1-201ENST00000216155 CUZD1Q86UP6 607 aa18.92■□□□□ 0.62
SYNGR1-201ENST00000216155 VRK3Q8IV63 474 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms