RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TBC1D21Q8IYX1 336 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 DNAJB8Q8NHS0 232 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 ATL1Q8WXF7 558 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 HERVK_113Q902F9 699 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 GLMNQ92990 594 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 GLYATL1Q969I3 302 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 AP2M1Q96CW1 435 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 FOPNLQ96NB1 174 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 VPS35Q96QK1 796 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 MRPS26Q9BYN8 205 aaKnown RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 ACPTQ9BZG2 426 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 ZCCHC2Q9C0B9 1178 aaKnown RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 CLMPQ9H6B4 373 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF696Q9H7X3 374 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 RMND5AQ9H871 391 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PRM3Q9NNZ6 103 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 AGPAT4Q9NRZ5 378 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 ZNHIT2Q9UHR6 403 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 SUFUQ9UMX1 484 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 TMED5Q9Y3A6 229 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PCDHB3Q9Y5E6 796 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 AK5Q9Y6K8 562 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 NUP210Q8TEM1 1887 aaPredicted RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 RNF103-CHMP3A0A140T963 221 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 FADS2P1A8MWK0 482 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 GFYI3L273 518 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 CLGNO14967 610 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 GSTA4O15217 222 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 TULP3O75386 442 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 NFATC1O95644 943 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PDYNP01213 254 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 RB1P06400 928 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 SYN1P17600 705 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 ITPKAP23677 461 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 SOX11P35716 441 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PLIN5Q00G26 463 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 SPANXN4Q5MJ08 99 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 TMTC4Q5T4D3 741 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PPP4R4Q6NUP7 873 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 DLEU7Q6UYE1 221 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PARS2Q7L3T8 475 aaKnown RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 NRSN1Q8IZ57 195 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF366Q8N895 744 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 L3MBTL4Q8NA19 623 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 TRPV3Q8NET8 790 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 BTN2A2Q8WVV5 523 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 SMG7Q92540 1137 aaKnown RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PYCR2Q96C36 320 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 FBXL8Q96CD0 374 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 MTFMTQ96DP5 389 aaKnown RBP8.06□□□□□ -1.12
VAMP3-201ENST00000054666 PIF1Q9H611 641 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 NOTCH4Q99466 2003 aa8.06□□□□□ -1.12
VAMP3-201ENST00000054666 SMIM31A0A1B0GVY4 71 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 TCRBV5S2A0A599 114 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 C5orf67F2Z3F1 127 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 WNT9AO14904 365 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 TSPAN6O43657 245 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 UGDHO60701 494 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 SLCO2B1O94956 709 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CLPTM1O96005 669 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 LDLRP01130 860 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 ANXA6P08133 673 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 BCKDHAP12694 445 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CDH1P12830 882 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CKMT2P17540 419 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 EPORP19235 508 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PRLHRP49683 370 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 POLE2P56282 527 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 OR4D2P58180 307 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 YBX1P67809 324 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 TXNL4AP83876 142 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 IRF8Q02556 426 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PLOD1Q02809 727 aaPredicted RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PRKCQQ04759 706 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CYP4F3Q08477 520 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 ELP6Q0PNE2 266 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CHIT1Q13231 466 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 FXNQ16595 210 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 FNDC3BQ53EP0 1204 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 USP39Q53GS9 565 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 TCEAL5Q5H9L2 206 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 FRG2Q64ET8 278 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 GLYATQ6IB77 296 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PDE12Q6L8Q7 609 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 LIPIQ6XZB0 460 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 DNAJC14Q6Y2X3 702 aaPredicted RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CYP2U1Q7Z449 544 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 RALGPS2Q86X27 583 aaPredicted RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CHERPQ8IWX8 916 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CBR4Q8N4T8 237 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 BEND7Q8N7W2 519 aaPredicted RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 KIAA1958Q8N8K9 716 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PHC3Q8NDX5 983 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 OR2T12Q8NG77 320 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CLHC1Q8NHS4 586 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 ITFG1Q8TB96 612 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CSGALNACT1Q8TDX6 532 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 OR8D1Q8WZ84 308 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CMTM7Q96FZ5 175 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 FRG2BQ96QU4 278 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms