RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 RFTN2Q52LD8 501 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 IL23RQ5VWK5 629 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 LIPJQ5W064 366 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 ZNF776Q68DI1 518 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 PNCKQ6P2M8 343 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 CYP20A1Q6UW02 462 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 PRR23BQ6ZRT6 265 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 ZNF547Q8IVP9 402 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 DPP10Q8N608 796 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 LILRA3Q8N6C8 439 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 OR56A3Q8NH54 315 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 HM13Q8TCT9 377 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 EZH1Q92800 747 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 GABRG3Q99928 467 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 C1orf50Q9BV19 199 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 DPEP2Q9H4A9 486 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 ACTL8Q9H568 366 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 ZDHHC4Q9NPG8 344 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 STOX2Q9P2F5 926 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 LEF1Q9UJU2 399 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 SLC22A14Q9Y267 594 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 ASPDHA6ND91 283 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 PRORSD1PA6NEY8 169 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 MGAT4DA6NG13 374 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 H3BNX3 289 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 NVLO15381 856 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 PRAMEF4O60810 478 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 RSL1D1O76021 490 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 C7P10643 843 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 G6PDP11413 515 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 JUPP14923 745 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 ACPPP15309 386 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 ZNF8P17098 575 aaPredicted RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 IL12AP29459 219 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 E2F2Q14209 437 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 PRAMEF9Q5VWM5 478 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 AGTRAPQ6RW13 159 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 DHDDSQ86SQ9 333 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 TRIM74Q86UV6 250 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 TRAPPC5Q8IUR0 188 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 RGL4Q8IZJ4 473 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 PPFIBP2Q8ND30 876 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 OR2T3Q8NH03 318 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 OR2L2Q8NH16 312 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 CSGALNACT1Q8TDX6 532 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 PYDC1Q8WXC3 89 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 LRRC58Q96CX6 371 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 TACO1Q9BSH4 297 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 LRTM1Q9HBL6 345 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 TRPV5Q9NQA5 729 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 FARSBQ9NSD9 589 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 C1orf109Q9NX04 203 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 PACSIN3Q9UKS6 424 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 DNMT3AQ9Y6K1 912 aaPredicted RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 LAMA2P24043 3122 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 CCDC154A6NI56 674 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 MAP3K7O43318 606 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 POP7O75817 140 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 C1orf105O95561 183 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 HSD17B1P14061 328 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 SLC2A4P14672 509 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 PDHA2P29803 388 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 SOX9P48436 509 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 SLC7A2P52569 658 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 SESN3P58005 492 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 RPS14P62263 151 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 RPA4Q13156 261 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 KIAA0040Q15053 153 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 CPSF6Q16630 551 aaKnown RBP eCLIP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 WSCD2Q2TBF2 565 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 C11orf96Q7Z7L8 435 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 THOC6Q86W42 341 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 CFAP206Q8IYR0 622 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 GLB1L3Q8NCI6 653 aaPredicted RBP13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 HBEGFQ99075 208 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 PKP4Q99569 1192 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 ACPTQ9BZG2 426 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 ELOVL6Q9H5J4 265 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 NMRK1Q9NWW6 199 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 CLDND1Q9NY35 253 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 GPRC5BQ9NZH0 403 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 PSMD13Q9UNM6 376 aa13.93□□□□□ -0.18
RTFDC1-201ENST00000023939 TRANK1O15050 2925 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 KLHL33A6NCF5 533 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 IGLON5A6NGN9 336 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 GPR89AB7ZAQ6 455 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 CASQ2O14958 399 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 PDYNP01213 254 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 GPR89BP0CG08 455 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 ITPKAP23677 461 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 SLC6A2P23975 617 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 ACADLP28330 430 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 IMPA1P29218 277 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 NTSR1P30989 418 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 CASP2P42575 452 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 WASP42768 502 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 RPL38P63173 70 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 CDK3Q00526 305 aa13.92□□□□□ -0.18
RTFDC1-201ENST00000023939 IMPG1Q17R60 797 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms